Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal18g1115 | ATGGATCAACACCATTCTCATCACTTCCACCGTACAAGATACGCTCCTCTTTCTTCTCAACAACACCACCACCACCATCAAAACCCTAACCACCTTCCTCCGTTACCATCACTCCCTCCACCGCCACCACCGCCACCTCACCCTCACCCCTCATCATACCCTCCTCAGTTCCATACTAATCATCCTGTCCATATATCAAATAGCCATAACCAGCACATTCACGTTCCTCGTCGTTCTTTCTCTGATTTCGACCATTCCTCATGGAACCCTAACCCTAGGGATATTTCTGAGAATCGTCTTCCAAGGAATTACTCCCCGGTTGATTTTGACCGTCAATTGCATCACCGTCCGGTGGAGCGTGTGCTTCCACCACCGCCACCGGTACCACAATATCAGCCTATTGATAACCGAAGGTATGATCGAGATGATGGGAGTTCTAGGTTGAGAATGGAGCGTGTGGATGTATATGAGTCAAAATCTAGAGAGAGGGAGAGGGAGAGGGAGAAGGAGAGGGGAGAGTTTGTGTGGGGACGGGGTGGCGAAGGAAATTACCATCAAAGGGATTTTGGATTGAAATATGATTCGCCTAGTCAGAGTGTGAGGGATATTGATGTTGATTTGAAACCTGAGGGTTATGTTCATGTGTATGATGTAGAAGGTGAGATTGAAGTAACTAGGGGTGATAGAAGAGAGGTTATTGGTGAAAGTAAGAGGTGGGTCAATGATAGGCAGATACCAAGAGAATTGCGTGATTCATCGAAGAATGAGATTGGTGCGGCTGGGAATAAAAATGGGTTTCAGATAGTGTCTGGGAAAAGAGATTATTATGGAAACGAATTGGGTAGGTACAATAGTAGAGGGAACATCAGGGAGGGTGCTCATGAATTTACTCGCACTTCTCCGCACAAACAGATACAGAAGAAGAGTGCTTTACTTAGGCTCCAGACGGTAAAACCGAATCATAGGAACCGCGAGAATGAGCAGTTACGCTATTCTGGCTATGCTGCTGAAAATAACTCTAGTTTCGTCAGGGGTAAGGAGCAACATCAAGCTGAAAATAACTCTAATTACTTCAGGGGTAAGGAGCAACATGGTTATGGGCATGGGGTGAAAGCTGAAGAGAGAAAAGGGAGTCCTGTTGAGCTTGATATTTCCTTCGAATCAAATTCTCTGGTGGCCAAGGCTATAGTGGCACCTTCAAGTTCTGCTATTGTTTGTGATACAAATATGACTCCAGTTTCTGATACAGATATGTGTTCTGCAGAAAAGAGGAGAAAGGTTTCGGTCTCTGACAGTGATCCTTCTGGTTTACCAACAGCTAAACTGTCTGCTGGTTCTGTAAGATTAGGTAGCTCGCCAACCAAAGAAAATGACACCTCTAGTTCTGCCAAGGACTTGAGCTCACAGAATAATGTTTCTGATACTTGTTCTCCACCATGCACCATCGTAGCCAATAATTCTCATGGTAAAAATGAGGCAACACTTTCAAATGTAACTACTAATGTTTGTGCTGAGAAATCACCCACAATGGTTGTCAAGAAGAAAAAAATTGTTAAAAGAGTGGTGAAGAAAGTTGTCAAAAATCATAATTCAACTGTGTCACATTCACCATCAGCAAATACACACCACGGAACTGTGCAAACAGATAGTCTCACTTTTAAATTACCAAATTCCCCTGATCCAGACAAAATAGAAACTTCCTTGAAGGAGAAAAGCACCATTTTTGACAAGGTGTCCACAGCAGCCTGTTTGCACTCTTTACAAAATGAAGGGAATGTATTGCCTGAAGATATGAAGGAAGGTTTATCCCCACTGAGTTTGGGGCCACATTCCAGGTCACAGGAATGTAAGACTGATGAAGATTCTGATATTGGGAAATCAGCCAGGTTTGAAGGCGATGGAAACTTTTCAAATTCCCCATCCCATGTTTCTTCTACTATTGATGATAAACGAAGTGATTTCGATTGTTTAGTTGCAAATAATTCTGCCCGTGACTTGCTTAGCATACCAAATATTGATGAAGTTACTAAATCATTAAATGGTATTACGTCTGAAATCATTGACATGGTTTATGATAATAAGCAATTATGCCAGAATGAAGTGTCTCTATCACTTGTTAACTATCCAAATATAGGATGCCCTCAAAATAGTTATCTCGTAGATGTAGGGGATGAAATGAATTGCAGATTGGTTTGTTCTGCTGATAATATAGTTAACACTGATCTTATAAATACATGTGATTCTGCAAATGATAGGGTTTATTGCTTGAATTCCAATTATCTTACAGGTTCAGAAAAGACTCATACAGGTTCAGGAGAGAATTTTACAGTTTCTGAGAGTGGCAATGATGGCATTGTTGGTAAGGCATTTTGTGAAAATAAGGCCCCCACAATCACTAAAAATGCCAATTCGGAAGAAAATCCAGATACAGCTGTTCCAAGTACTGGAATTATTGCTATTTTGAGTTCAGGAAACATTGGGATTGAAGAAGGTCCAAACTGCATACAACATGCTAGTGTACTGAAACAGGGTTCTGATAATGAATCAGCTAATTCAGAAGATAGTATCACTGTTCACTGTTTTAATACTGGAAAACTGGTGCCTCCCAGTGATGTCACCGTATCCCCTGAGAATTGTGTTACAGAAGAAACATTGTCAAATTTGAAAATTTCTGTTGCATTTGATGAAGGAAATACAAATAAGATAAAAGAAAGAGAAGTTAAGACTCATTTAAATATTCTGAGTTCAAAGATGGAGGGTGTATTTACTGACCCACTAAATCCAGTTAGCTATGCAACTGATGTTGATAGAGCCTCAAATTTCTTGAAAAATCCAAGTCCTTCACAAGATTTAGATCAATCTGTTCAAAGCTTAGATTTTAATTCCGAAACCAGTGCAGATGAGGCCACTACTCTACATGGGAAACTAGAGGTTTCTGAAGCTGAATGCTACATTGAAAATAATGTCAATGATGATGCAAATAAGGTTTCACGAGTTTCTAAAAGGAAAAAACTAAAAAAAGTCACCGCTGAACACCCAAGATTCAGCTATGCGATTGTGGTCCCTACATCTTGTGCAGATGTTCCCACCAGTTTCAGTGATAACCAAGCACACGAGAAAGAAAGTGCATTGTCAAGCATGAGTACTCTATCAATTGCCCACTCAATACCTTATTCAGAGGATATCACTAAATTGCCTAACAATATTTCAGTTGGAGGTTCTTTTGATTCTATTGATGCAGATAGGAGAATCATGAGTTCTGAGCATCTGGAATTACAGCACTCAGACATTGCCTCTTATTCACTGCGTGAGAATGTAGCCATTCTAAATGTTCAGTTCTCAATGTTGCAAGGTGAGACAAAGGATAATAGTATTCCAATTCTGCCTATAAGTAGTGCTCAAACAGACACTTCAATCATTGGAAATATTAAGGGAGAAAAGACTGATTTACAGGCTGTTGAAGAAAATTACCAATGTAGAGGCCTCGTCCAAATATCTCCTAGTGCTGATATGGAATCTAATGATATCAATATGAAAGAGGATTTACTACCTCAGCAGAACCTCATGTCCTGTCCTACCAATGGTGATGGAGTCAACACTATTAATTCTGATTTGATTGAGGATGTGCCTGATGCACTATCAAATATGTGTTCTAAAGGGATGGCATCTGAAGATTATTCGAAAGTTAAAACTCATGGTTTGAATTCATATGATTCAGAATTAAACGGGGGCAGAAATCAGGCAGGTGGTATCATTCCTAAAACTTTCCAAGGTCATTCTTTCACCCTTTCAAAGACAAAGTCAAAGACATCTGCCTCTTCAACCCATATATCAAAACCTCGAACTTGGCATCGTGCATTAAATACTTCTGCTTCTCTACCTGGAATCAAGCCTTTGGTAGCAACAACAGTTCCTCCCAAAGGGCCAAATTTAGAAAGGAAAGGGAATTTTCAAAAGACCTCTTACATTCGTAAAGGTAATAGTCTCGTTAGAAAACCTTCTCTGGTTTCTGCTTCACCTCAAATCTCCTCTGCTAAGCAGTTAACTTCCTTTGGCTTAGATGAATTACCAAAAAGCACCAGATCTGAAAAGCAGGTTGATATGATAGGACCAATTTTGAAAGCAGGAGTGACAAATGCTCCTCAGCAGAGGCAGAAAATACCTCCAGCACCTATTAACACCATGTCAGAGGAAAATATGTCCCCCCCACTGGTTGGACCTCCTTCCAGTGTTTGCTATGATGCACCGGACTCTTGTGAAATTGCAACGAAGCATTATGGAACTCCCAACGATCAAGCTGACCCATCAAATAATGAGGAGAGCCAAGTTGAAGCCAATGATGAAAGTGTTTCTTCTTTGAACACAAAGATAGTAGTATATATAAAGCCCAAAACGAATCAATTGGTTGCAACTTCGAATTCTCATGATGTTTCTGTCTCTACTGATGACAAGGCTCATACAGCCTTCTCTGATGGCTACTACAAGAGGAGCAAAAATCAATTAGTTAGGACTACATTTGAAAGTCGTACCAACCAGACAGTTGCAATGCCTAATAGCACTGTAAATTCTGACGGACAACTGGTTCATAATAAGGTTCTTTGCAACAGGAGATTTAGTAAGAGACGGTCACTTAAGGTTCCTAGGAGCTCCTGCAAACCTTTAAGAGCCTCATTGGTGTGGACACTTCGGGGGGATAATTCTTCCAAAAATGACAGTGACTCACAGCATTATCAAAAGGTTTTACCTCATTTGTTTCCATGGAAAAGAGCAACATATTTAAGAGGTTTTGTTAATAATTATTCTTCAAGTTCCAATCGTAGTTCCTTATCTACAATCAGCAAGAAGTTGCTTCTATTGAGAAAGAGGGATACTGTTTACACTAGGTCGACCCATGGGTTTTCTCTTTGGAAATCCAAGGTATTAGGTGTTGGCGGGTCTAGTTTAAAATGGTCAAAATCCATAGAGAAGCACTCGAAGCAAGCAAATGAGGAAGCCACACTCGCTGTTGCTGCAGTAGAGAGGAAAAAGAGAGAGCAGGAAGATGCAACCTTCATTGGTTCTCAGGCAAAGAGAGAACGCATATTTCGTATTGGTTCAGTTCGTTATAGAATGGATCCTTCCAGGCGGACACTTCAGAGGATTTCAGATGGTGAGCCCCTGTCCTCTGCTTCTGTTCCTTCAGGTTCGACTGCCAAAAGAGCTTACATTCCAAGGAGATTAGTGATTGGAAATGATGAATATGTCCGAATTGGCAACGGTAACCAGCTTATCAGAGACCCAAAGAAGCGAACTCGAAAATTGGCAAATGAAAAAGTTAGATGGAGTTTGCACACTGCCAGACAGCGGTTGGCTCGAAAGCAGAAGTATTGTCAGTTTTTTACTAGATTTGGGAAATGTAACAAGGATGGTGGCAAGTGTCCTTATATTCACGATCCCTTAAAAATCGCTGTCTGTACTAAGTTCCTGAATGGTTTATGTTCTACTCCCAACTGCAAATTGACTCATAAGGTTATTCCGGATAGAATGCCAGATTGTTCTTATTTTTTGCAAGGCTTATGCACAAACAGAGATTGCCCATATAGACATGTCAATGTGAACCCGAAGGCATCTATTTGTGAAGGATTTCTTAAGGGTTATTGTGCTAATGGGAATGAGTGTCGGAAGAAGCATAGCTATGTCTGTCCTACTTTTGAAACAACAGGTACTTGTAGTGATGGAACCAAATGCAAACTTCACCACCCCGTAAGACAAAGCAAGGGAAAGAAAAGGAAGAGACCCGAAGAGCAGAATAGTAGAGGGCGTTACTTCGGTTCTAGTCCGATTCATGTTTATGAACCCGGGATGGTCGTGGCTCCGAAGCAACATCAACAGAATGATGATGACCTTGAAGAACTTCCCGACTACATTGGCCTTGATGATGGCGATGTTGATGTTGAAGAAGAAGTTTCAGAAAATATTGATCAATCATTTGAGCAAGCAATGTGTGATGACTGTGATTCTTTGGATTTAGAGTTGGCTAATTTTGATGATCTTATTAAACCGGTTCTTATAATGAAACCATCTCAATCCTAG | 6072 | 0.4061 | MDQHHSHHFHRTRYAPLSSQQHHHHHQNPNHLPPLPSLPPPPPPPPHPHPSSYPPQFHTNHPVHISNSHNQHIHVPRRSFSDFDHSSWNPNPRDISENRLPRNYSPVDFDRQLHHRPVERVLPPPPPVPQYQPIDNRRYDRDDGSSRLRMERVDVYESKSREREREREKERGEFVWGRGGEGNYHQRDFGLKYDSPSQSVRDIDVDLKPEGYVHVYDVEGEIEVTRGDRREVIGESKRWVNDRQIPRELRDSSKNEIGAAGNKNGFQIVSGKRDYYGNELGRYNSRGNIREGAHEFTRTSPHKQIQKKSALLRLQTVKPNHRNRENEQLRYSGYAAENNSSFVRGKEQHQAENNSNYFRGKEQHGYGHGVKAEERKGSPVELDISFESNSLVAKAIVAPSSSAIVCDTNMTPVSDTDMCSAEKRRKVSVSDSDPSGLPTAKLSAGSVRLGSSPTKENDTSSSAKDLSSQNNVSDTCSPPCTIVANNSHGKNEATLSNVTTNVCAEKSPTMVVKKKKIVKRVVKKVVKNHNSTVSHSPSANTHHGTVQTDSLTFKLPNSPDPDKIETSLKEKSTIFDKVSTAACLHSLQNEGNVLPEDMKEGLSPLSLGPHSRSQECKTDEDSDIGKSARFEGDGNFSNSPSHVSSTIDDKRSDFDCLVANNSARDLLSIPNIDEVTKSLNGITSEIIDMVYDNKQLCQNEVSLSLVNYPNIGCPQNSYLVDVGDEMNCRLVCSADNIVNTDLINTCDSANDRVYCLNSNYLTGSEKTHTGSGENFTVSESGNDGIVGKAFCENKAPTITKNANSEENPDTAVPSTGIIAILSSGNIGIEEGPNCIQHASVLKQGSDNESANSEDSITVHCFNTGKLVPPSDVTVSPENCVTEETLSNLKISVAFDEGNTNKIKEREVKTHLNILSSKMEGVFTDPLNPVSYATDVDRASNFLKNPSPSQDLDQSVQSLDFNSETSADEATTLHGKLEVSEAECYIENNVNDDANKVSRVSKRKKLKKVTAEHPRFSYAIVVPTSCADVPTSFSDNQAHEKESALSSMSTLSIAHSIPYSEDITKLPNNISVGGSFDSIDADRRIMSSEHLELQHSDIASYSLRENVAILNVQFSMLQGETKDNSIPILPISSAQTDTSIIGNIKGEKTDLQAVEENYQCRGLVQISPSADMESNDINMKEDLLPQQNLMSCPTNGDGVNTINSDLIEDVPDALSNMCSKGMASEDYSKVKTHGLNSYDSELNGGRNQAGGIIPKTFQGHSFTLSKTKSKTSASSTHISKPRTWHRALNTSASLPGIKPLVATTVPPKGPNLERKGNFQKTSYIRKGNSLVRKPSLVSASPQISSAKQLTSFGLDELPKSTRSEKQVDMIGPILKAGVTNAPQQRQKIPPAPINTMSEENMSPPLVGPPSSVCYDAPDSCEIATKHYGTPNDQADPSNNEESQVEANDESVSSLNTKIVVYIKPKTNQLVATSNSHDVSVSTDDKAHTAFSDGYYKRSKNQLVRTTFESRTNQTVAMPNSTVNSDGQLVHNKVLCNRRFSKRRSLKVPRSSCKPLRASLVWTLRGDNSSKNDSDSQHYQKVLPHLFPWKRATYLRGFVNNYSSSSNRSSLSTISKKLLLLRKRDTVYTRSTHGFSLWKSKVLGVGGSSLKWSKSIEKHSKQANEEATLAVAAVERKKREQEDATFIGSQAKRERIFRIGSVRYRMDPSRRTLQRISDGEPLSSASVPSGSTAKRAYIPRRLVIGNDEYVRIGNGNQLIRDPKKRTRKLANEKVRWSLHTARQRLARKQKYCQFFTRFGKCNKDGGKCPYIHDPLKIAVCTKFLNGLCSTPNCKLTHKVIPDRMPDCSYFLQGLCTNRDCPYRHVNVNPKASICEGFLKGYCANGNECRKKHSYVCPTFETTGTCSDGTKCKLHHPVRQSKGKKRKRPEEQNSRGRYFGSSPIHVYEPGMVVAPKQHQQNDDDLEELPDYIGLDDGDVDVEEEVSENIDQSFEQAMCDDCDSLDLELANFDDLIKPVLIMKPSQS | 2023 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal18g1115 | 2023 | MobiDBLite | consensus disorder prediction | 432 | 474 | - | - | |
| Lal18g1115 | 2023 | MobiDBLite | consensus disorder prediction | 414 | 474 | - | - | |
| Lal18g1115 | 2023 | MobiDBLite | consensus disorder prediction | 1423 | 1449 | - | - | |
| Lal18g1115 | 2023 | SMART | c3hfinal6 | 1893 | 1915 | IPR000571 | GO:0046872 | |
| Lal18g1115 | 2023 | SMART | c3hfinal6 | 1839 | 1864 | IPR000571 | GO:0046872 | |
| Lal18g1115 | 2023 | SMART | c3hfinal6 | 1784 | 1812 | IPR000571 | GO:0046872 | |
| Lal18g1115 | 2023 | SMART | c3hfinal6 | 1866 | 1892 | IPR000571 | GO:0046872 | |
| Lal18g1115 | 2023 | SMART | c3hfinal6 | 1813 | 1837 | IPR000571 | GO:0046872 | |
| Lal18g1115 | 2023 | Gene3D | - | 1811 | 1865 | - | - | |
| Lal18g1115 | 2023 | MobiDBLite | consensus disorder prediction | 56 | 70 | - | - | |
| Lal18g1115 | 2023 | Gene3D | - | 1866 | 1928 | - | - | |
| Lal18g1115 | 2023 | ProSiteProfiles | Zinc finger C3H1-type profile. | 1866 | 1893 | IPR000571 | GO:0046872 | |
| Lal18g1115 | 2023 | MobiDBLite | consensus disorder prediction | 82 | 179 | - | - | |
| Lal18g1115 | 2023 | ProSiteProfiles | Zinc finger C3H1-type profile. | 1784 | 1813 | IPR000571 | GO:0046872 | |
| Lal18g1115 | 2023 | MobiDBLite | consensus disorder prediction | 32 | 55 | - | - | |
| Lal18g1115 | 2023 | MobiDBLite | consensus disorder prediction | 348 | 374 | - | - | |
| Lal18g1115 | 2023 | Coils | Coil | 1662 | 1682 | - | - | |
| Lal18g1115 | 2023 | MobiDBLite | consensus disorder prediction | 1914 | 1940 | - | - | |
| Lal18g1115 | 2023 | MobiDBLite | consensus disorder prediction | 613 | 628 | - | - | |
| Lal18g1115 | 2023 | ProSiteProfiles | Zinc finger C3H1-type profile. | 1839 | 1865 | IPR000571 | GO:0046872 | |
| Lal18g1115 | 2023 | MobiDBLite | consensus disorder prediction | 531 | 555 | - | - | |
| Lal18g1115 | 2023 | PANTHER | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 3 | 373 | 2019 | - | - | |
| Lal18g1115 | 2023 | MobiDBLite | consensus disorder prediction | 531 | 565 | - | - | |
| Lal18g1115 | 2023 | MobiDBLite | consensus disorder prediction | 594 | 648 | - | - | |
| Lal18g1115 | 2023 | MobiDBLite | consensus disorder prediction | 82 | 98 | - | - | |
| Lal18g1115 | 2023 | MobiDBLite | consensus disorder prediction | 135 | 176 | - | - | |
| Lal18g1115 | 2023 | PANTHER | CCCH ZINGC FINGER | 373 | 2019 | - | - | |
| Lal18g1115 | 2023 | MobiDBLite | consensus disorder prediction | 16 | 70 | - | - | |
| Lal18g1115 | 2023 | MobiDBLite | consensus disorder prediction | 1429 | 1449 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal18g1115 | Lal-Chr18 | 14120680 | 14130606 | Dispersed/Wgd |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | C3H | Lal18g1115 | None | None | None |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal18g1115 | - | - | lang:109337833 | 3466.78 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lal18g1115 | 18 | 14120680 | 14130606 | Lal18g1115 | 18 | 14120680 | 14130606 | ECH |