Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1113 ATGTCTAGTACGGTTGGTAAGGTCATCAAGTGCAGAGCTGCGGTGGCGTGGGAGGCAGGGAAGCCACTAGTGATAGAAGAAGTGGAGGTTGCGCCGCCGCAGCGCGGTGAAGTCCGTTTGAAGATCCTCTACAATTCTCTTTGCCGTACCGATGTTTACTGGTGGGAGGCCAAGGTCCAGAATCCATTATTTCCCCGCATACTAGGTCATGAAGCTGCAGGGATTGTGGAGAGCATAGGTGAGGGTGTGACTGATCTGAAAGCAGGGGACCATGTCCTCCCTGTGTTCACTGGAGAGTGTGGAGAATGTGCACATTGCAAGTCAAATGAGAGCAACATGTGTGAGCTACTCAGAATCAACACAGATAGGGGTGTTATGCTCAATGATGGAAAAACTAGATTTTCCAAAAATGGACAACCCATTTACCATTTCCTCGGAACCTCTACATTCAGTGAATACACTGTTGTTCATGCTGGATGTGTTGCAAAGATCAACCCTGCTGCTCCACTTGACAAAGTTTGTGTTCTCAGTTGCGGATTCTGCACAGGTTTTGGTGCTACTATAAATGTTGCAAAACCAAAGCCAGATTCTTCTGTTGCTGTCTTTGGACTTGGAGCTGTTGGTCTTGCTGCTGCTGAAGGGGCAAGGCTATTAGGTGTATCTAGAATCATTGGGGTTGATTTAAATCCCAACAGATTTGAGGAAGCCAAAAAGTTTGGTGTCACTGACTTTGTGAACCCTAAGGATCATAACAAACCTGTGCAACAGGTCATTGCTGAGATGACTAATGGAGGAGTAGATCGCGCTGTTGAATGTACCGGAAACATCCAAGCTTCCATTGCAGCATTTGAATGTGTTCATGATGGATGGGGTGTTGCTGTTCTTGTTGGTGTGCCGAAAAAAGATGCCGAATTTAGAACTAATCCTATGAATTTCTTGGCTGGGAGAACTCTTAAGGGCACCTTCTACGGTAACTACAAACCCCGCACCGATCTTCCTTCTATTGTGGAGAAGTGCATGAACAAGGAGCTAGAAGTGGAGAAATTTATCACTCACTCAATTCCATTCTCAGAGATTAATAAAGCATTTGAATACATGATAAAAGGGGAGGGTATAAGGTGCCTTATCTGCATGGAAGAGTAA 1143 0.4541 MSSTVGKVIKCRAAVAWEAGKPLVIEEVEVAPPQRGEVRLKILYNSLCRTDVYWWEAKVQNPLFPRILGHEAAGIVESIGEGVTDLKAGDHVLPVFTGECGECAHCKSNESNMCELLRINTDRGVMLNDGKTRFSKNGQPIYHFLGTSTFSEYTVVHAGCVAKINPAAPLDKVCVLSCGFCTGFGATINVAKPKPDSSVAVFGLGAVGLAAAEGARLLGVSRIIGVDLNPNRFEEAKKFGVTDFVNPKDHNKPVQQVIAEMTNGGVDRAVECTGNIQASIAAFECVHDGWGVAVLVGVPKKDAEFRTNPMNFLAGRTLKGTFYGNYKPRTDLPSIVEKCMNKELEVEKFITHSIPFSEINKAFEYMIKGEGIRCLICMEE 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1113 380 Pfam Alcohol dehydrogenase GroES-like domain 36 163 IPR013154 -
Lal18g1113 380 CDD alcohol_DH_plants 9 376 - -
Lal18g1113 380 SUPERFAMILY GroES-like 4 187 IPR011032 -
Lal18g1113 380 Pfam Zinc-binding dehydrogenase 206 328 IPR013149 -
Lal18g1113 380 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Lal18g1113 380 SUPERFAMILY GroES-like 329 376 IPR011032 -
Lal18g1113 380 Gene3D - 19 370 - -
Lal18g1113 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 341 IPR036291 -
Lal18g1113 380 Gene3D - 183 321 - -
Lal18g1113 380 PANTHER ALCOHOL DEHYDROGENASE 4 378 - -
Lal18g1113 380 PANTHER ALCOHOL DEHYDROGENASE-RELATED 4 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1113 Lal-Chr18 14108350 14112246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1113 37 370 Monolignol Biosynthesis Gene Families AT1G72680 25.073 4.29e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1113 K18857 - gmx:100775490 644.425