Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal18g1106 | ATGCAGAAGGTTCTTCCACCTCATGCAGAAATCACCAACAAAGCCACTGAGACAATTCAAAAGTGTGTGTATAGGTTCATAACTACTGTCACAAGTGAGGCCAATAAGAAGTGCAAGAGCAAGAAGAGAAAGATTGTTGCTGCAAGGGATTTGCTATCTGCTATGGAAGGGTTAGGGTTAAATAACTATGTGGAGCCTCTCCTTGCTTACCATGATAGTTACCTTGAGAATGAAGTTAAACACTTAATAATGGGTGGTAATAATAATGGTAAGAGAGTTGAAAATGATGTGATGGGTCTAACACCACAACTTCAAGAGTCTAGTGGTGGCTCTAATAGTATCCCACTCACTCCAATCTTTAACCCACCAACAAGTGTTAGTAGCTCAGCTAGTTGCAATGCTATGGAGAACTTTGATCTATTGCCTTTCCTAGATCCTTGA | 441 | 0.4036 | MQKVLPPHAEITNKATETIQKCVYRFITTVTSEANKKCKSKKRKIVAARDLLSAMEGLGLNNYVEPLLAYHDSYLENEVKHLIMGGNNNGKRVENDVMGLTPQLQESSGGSNSIPLTPIFNPPTSVSSSASCNAMENFDLLPFLDP | 146 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal18g1106 | 146 | PANTHER | CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED | 1 | 92 | IPR027113 | GO:0001228|GO:0006355|GO:0016602 | |
Lal18g1106 | 146 | PANTHER | NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 | 1 | 92 | - | - | |
Lal18g1106 | 146 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 1 | 55 | IPR003958 | - | |
Lal18g1106 | 146 | SUPERFAMILY | Histone-fold | 1 | 81 | IPR009072 | GO:0046982 | |
Lal18g1106 | 146 | Gene3D | Histone, subunit A | 1 | 109 | IPR009072 | GO:0046982 |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal18g1106 | 1 | 79 | CCAAT-HAP3 Transcription Factor Family | AT1G21970 | 48.101 | 1.94e-22 | 87.4 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NF-YB | Lal18g1106 | CBFD_NFYB_HMF | 1.3e-12 | CL0012 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal18g1106 | K08065 | - | gmx:100800011 | 90.5077 |