Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1100 ATGGACTCGCCGCCGATGACGCCGGAAAACTTACCCCTCTCGGAGGCAGAAAAGATAATACTCCGATGGGACTCCACCGCATCGGATGAAGCGCGTGAGAAGATGATCTTCGACGGCGACCGCCACGAAGTCGATCTCTACCTCCAAGCCGTCGATGAAATCCAACGCTCCATCTCCTCCACCTCCATCTCCGACGACACGAACAAAGTCAACCCCGCCGTTCAGATCGCCATGGCTCGCCTCGAAGACGAGTTTCGCAACATCCTTATCTCCCACACTATCCCTATTGAAGCTGATTCTCTCACTGAGCAAGACCTAGAACAACAACCTTCATCTTCATCTTCTCCGATTCATCATGAACCTAATGATGGTGACAGTAATTATGTTAACGATGAAGGTAACAAGCTATTTAGGTTTAACAGTGAAGGAACTTGTTCTAATGTGAGTGTTAATAGTTCTTATCGTTCAATAAGTAGTATTCGAGAGATCGATTTGATTCCCTCTGAGGCAGTGTATGATCTTCGTTGCATCGCGGAACGAATGATCTCTTCAGGTTACTTGCGAGAGTGCATTCAGGTTTATGGAAGTGTGAGAAAATCAGCGGTTGATTCGAGTTTTCGCAAACTCGGGATCGAAAAATTGAGCATTGGTGATGTTCAGAGATTGGAATGGGAGCAGCTTGAAACTAAGATCAGGCGTTGGATTAGAGCGGCTAAGGTTTGTGTTAGGACACTTTTCGCGAGTGAGAAGAGGTTATGTGAGCAAATATTTGATGGTGTTGGTACTTGTATTGATGATGCTTGTTTTATGGAAACTGTGAAAGGTCCTGCTATTCAGCTTTTTAATTTTGCTGAGGCTATTAGTATTAGTAGGAGGTCACCTGAGAAGTTGTTTAAGATTCTTGACCTTCATGATGCTTTGATGAATTTGATGCCTGATATTGATTTTGTGTTCGATTCTAAGTCATCCGATTCGATTCGGGTTCAGGCTGCCGAGATTCTTTCGCGGCTGGCTGAGGCTGCTAGAGGGATTTTGTCTGAGTTTGAGAATGCTGTGTTGAGGGAACCTTCCAAGGTTCCTGTCCCTGGTGGCACAATTCACCCTTTGACTAGGTATGTTATGAACTATATCAGTTTGATCTCTGATTATAAGATTACTTTGAATGAGCTTATAGTGTCCAAGCCTTCGACTGGGTCACGATATTCGGGTGATCCTTCCACCCCAGATATGGATTTTGAGGAGATCGAGGAGAAGACTCCTTTGGATATTCACTTGATTTGGATTATTGTGATATTGCAGTTTAATTTGGATGGTAAGTCTAAGCATTATAAGGATGCATCTTTGTCTCACCTTTTTATAATGAACAATGTTCACTATATTGTTCAAAAGGTGAGAGGATCTGCTGAATTGAGGGAGATGATTGGTGATGATTATTTGAGGAAACTAACGGGGAAGTTCCGGCAGGCTGCTATTAGCTACCAGAGAGCAACTTGGGTGGGGGTGTTGTATTGTTTGAGAGATGAAGGTTTGCATGTGAGTGGTGGTTTTTCTTCAGGGGTGTCAAAGAGTGCTTTGAGAGAAAGGTTTAAGTCTTTCAATGCTATGTTTGAAGAGGTTCATAGGACTCAATGTGTTTGGTTGATACCGGATTCTCAACTCAGGGAAGAGCTCCGAATATCTATATCAGAGAAGCTGATACCGGCATATAGGTCATTTCTCGGGCGCTTCAGGAGTCACATAGAGAGTGGAAGACATCCGGAGAATTACATTAAGTATTCTGTTGAAGACCTGGAGGATGCTGTTTTGGATTTTTTTGAAGGAATCCCTGTTTCTCTGCACTTGAGGAGGAGATCTAATTGA 1860 0.4349 MDSPPMTPENLPLSEAEKIILRWDSTASDEAREKMIFDGDRHEVDLYLQAVDEIQRSISSTSISDDTNKVNPAVQIAMARLEDEFRNILISHTIPIEADSLTEQDLEQQPSSSSSPIHHEPNDGDSNYVNDEGNKLFRFNSEGTCSNVSVNSSYRSISSIREIDLIPSEAVYDLRCIAERMISSGYLRECIQVYGSVRKSAVDSSFRKLGIEKLSIGDVQRLEWEQLETKIRRWIRAAKVCVRTLFASEKRLCEQIFDGVGTCIDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALMNLMPDIDFVFDSKSSDSIRVQAAEILSRLAEAARGILSEFENAVLREPSKVPVPGGTIHPLTRYVMNYISLISDYKITLNELIVSKPSTGSRYSGDPSTPDMDFEEIEEKTPLDIHLIWIIVILQFNLDGKSKHYKDASLSHLFIMNNVHYIVQKVRGSAELREMIGDDYLRKLTGKFRQAAISYQRATWVGVLYCLRDEGLHVSGGFSSGVSKSALRERFKSFNAMFEEVHRTQCVWLIPDSQLREELRISISEKLIPAYRSFLGRFRSHIESGRHPENYIKYSVEDLEDAVLDFFEGIPVSLHLRRRSN 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1100 619 Pfam Exo70 exocyst complex subunit 233 601 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lal18g1100 619 Gene3D Exocyst complex component Exo70 19 613 - -
Lal18g1100 619 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 11 618 - -
Lal18g1100 619 PANTHER EXOCYST COMPLEX PROTEIN EXO70 11 618 IPR004140 GO:0000145|GO:0006887
Lal18g1100 619 SUPERFAMILY Cullin repeat-like 15 606 IPR016159 -
Lal18g1100 619 MobiDBLite consensus disorder prediction 102 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1100 Lal-Chr18 14038709 14040568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1100 16 618 EXO70 exocyst subunit family AT1G72470 71.521 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1100 K07195 - gmx:100808671 972.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0562 6 3615657 3617531 Lal18g1100 18 14038709 14040568 LSH