Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1099 ATGTTCTTTAACATTTTTCAAATGACATATTCTATGTCAGAAGCTGAAGCTTTGATGATTCTTAAAAAATCATTTTCCAATGCTAAAACTCTTGATACTTGGGTGGCTGGCACTTCACCTTGCAGTGAAGATGGTCAATGGGTAGGTGTTGCATGCAGCAATGGCCGAGTCATCGGGCTTCGCCTCGGAGATATGGGGTTACAAGGGAAAATTGATGCTGATGCATTGCTTGAACTTAAGGCTCTTAGAACTATAAGCCTTGTTAAGAATTCTTTTAATGGTTCTATACCAGAACTCAGTAAATTTGGTTTCTTGAAAGCAATTTATTTGTCAGAGAATAAGTTCTCAGGAGAAATTCCTCAAGATTACTTTCAAGAAATAAGGTCTTTGAAGAAATTGTGGCTAGATGGTAATGAATTCACAGGCCAAATTCCTTCATCATTGTCTAAAATGCCTCAACTTATGGAGTTACATTTGGAGAATAATAAGTTTAATGGAACTATTCCAGATATTGATAACCCTGCATTGGTGGATTTCAATGTGTCAAACAACAAATTGGAAGGTAGTGTTCCAACTAGTTTATTGAGGTTCAATGAGAGTTCCTTTGATGGGAATTCTGGTCTTTGTGGTGAGAAGTTTGGGATAAAATGTGAGGCACCGAATCCGATTTCGGCAGAGAAGAATGGAGACACAATCATCATTCATAATGGTATTGCACCTCAAACAGATGAGGGTAAGATTAATGCAGCTTCAATTGCAGGCATTATAGCATCATGTATAGTGGTTATTCTGATTTTTACTATTTTGGTTGTGAGATCAAGGAAAAAGAATGGTAATGAGGATTTTGATGGTATAATTGGAAAAGAGAATAATGAAGATGCAGTAGAAGTTCAAGTAACTGCACCAGTGAAAAGAGAAGTTTCTGCTGAACCAATAAGAAAATCAACATCTAACAGAAAAGGAGGATCAGGACATCATAATAATGTTAAGGGGGTTGGAGAACTTGTGATGATAAATGAGGAAAAGGGTGTTTTTGGTTTACCAGATTTGATGAAAGCAGCTGCAGAAGTGTTAGGAAATGGAGCATTTGGATCTTCTTACAAAGCTGTGATGGCTAATGGAGTTGCAGTAGTGGTGAAAAGGACTAGAGATATGAATGCATTGGAAAAAGATAGTTTTGATGCTGAGATGAAAAAGATTGCAAATCTTAAACACTGGAATATCTTGACCCCTTTAGCTTATCATTACAGAATGGATGAGAAACTAGTGATCTCTGAGTATGTTCCTAGAGGCAGTTTACTCTTTTTGCTGCATGGTGATAGAGGATCATCACATGCTGAACTAGATTGGCCTTCACGGTTAAAGATCGTAAAAGGAATAGCTGAAGGGATGCGATATCTTCACACGGAACTCGCTTCTTCCGATCTACCACATGGAAATCTCAAGTCAAGCAACATTCTCCTTGGACCAAATTATGAACCACTTTTAGTAGATTATGGTTTCAGCCACATGATCAACCCTGCAAGTGCAGCACAAGAACTATTTGCTTATAAGGCTCCTGAAGCAGCATCACAAGGCCAAGTCTCACATAGTTCTGATGTTTACTGTCTTGGTATTGTTATACTTGAAATACTCACTGGCAAATTCCCTTCTCAATATCTCAACAATGAGAAGGGTGGAATTGATTTAGTGCAATGGGTTGCATCAGCAATATATGAAGGAAGGGAATTAGAACTTCTTGATCCTGAGATTGCAACCTCAAGGAATAACTCACAACAAGGTGAAATGGAAAAACTACTACATATTGGTGCTGCATGTACTCAAAATAACCCTCACCAACGCTTACACATGTCAGAAGCTATTAGAAGAATAGAAGAGATAAACAATGAAGGTGGCAAAGGGTCAAGAACAATAGAGGTTTTACCATCTCTGAGAAATGGCTATGCAGATTCTCATAATGTATTAGGAGCACAAGAACATGGTAGTGAACAATATAGTAGAAGAGAAGAATCAAATAGCTTTGGGAGCAAAGATAATAACTTTGACTTTGGTATATCATAA 2061 0.3765 MFFNIFQMTYSMSEAEALMILKKSFSNAKTLDTWVAGTSPCSEDGQWVGVACSNGRVIGLRLGDMGLQGKIDADALLELKALRTISLVKNSFNGSIPELSKFGFLKAIYLSENKFSGEIPQDYFQEIRSLKKLWLDGNEFTGQIPSSLSKMPQLMELHLENNKFNGTIPDIDNPALVDFNVSNNKLEGSVPTSLLRFNESSFDGNSGLCGEKFGIKCEAPNPISAEKNGDTIIIHNGIAPQTDEGKINAASIAGIIASCIVVILIFTILVVRSRKKNGNEDFDGIIGKENNEDAVEVQVTAPVKREVSAEPIRKSTSNRKGGSGHHNNVKGVGELVMINEEKGVFGLPDLMKAAAEVLGNGAFGSSYKAVMANGVAVVVKRTRDMNALEKDSFDAEMKKIANLKHWNILTPLAYHYRMDEKLVISEYVPRGSLLFLLHGDRGSSHAELDWPSRLKIVKGIAEGMRYLHTELASSDLPHGNLKSSNILLGPNYEPLLVDYGFSHMINPASAAQELFAYKAPEAASQGQVSHSSDVYCLGIVILEILTGKFPSQYLNNEKGGIDLVQWVASAIYEGRELELLDPEIATSRNNSQQGEMEKLLHIGAACTQNNPHQRLHMSEAIRRIEEINNEGGKGSRTIEVLPSLRNGYADSHNVLGAQEHGSEQYSRREESNSFGSKDNNFDFGIS 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1099 686 MobiDBLite consensus disorder prediction 308 328 - -
Lal18g1099 686 ProSiteProfiles Protein kinase domain profile. 352 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1099 686 Pfam Leucine rich repeat 105 164 IPR001611 GO:0005515
Lal18g1099 686 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 5 632 - -
Lal18g1099 686 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 5 632 - -
Lal18g1099 686 Gene3D Ribonuclease Inhibitor 176 210 IPR032675 -
Lal18g1099 686 Pfam Leucine rich repeat N-terminal domain 13 53 IPR013210 -
Lal18g1099 686 SUPERFAMILY Protein kinase-like (PK-like) 356 624 IPR011009 -
Lal18g1099 686 Gene3D Transferase(Phosphotransferase) domain 1 428 639 - -
Lal18g1099 686 Gene3D Phosphorylase Kinase; domain 1 325 427 - -
Lal18g1099 686 Pfam Protein kinase domain 356 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1099 686 SUPERFAMILY L domain-like 12 197 - -
Lal18g1099 686 MobiDBLite consensus disorder prediction 658 686 - -
Lal18g1099 686 Gene3D Ribonuclease Inhibitor 11 173 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1099 Lal-Chr18 14029848 14032324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1099 12 627 Receptor kinase-like Gene Family AT5G20690 46.213 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal18g1099 Pkinase 4.9e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1099 - - lang:109337801 1202.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0563 6 3622018 3624659 Lal18g1099 18 14029848 14032324 LSH
Lal22g0507 22 3369464 3372086 Lal18g1099 18 14029848 14032324 LSH