Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1075 ATGAGCAAGATCAAACAATTCTTCGCCATAGTCAGAGATTCCGACAAGATGAAACAAGTCTTTGTCGGAATCTCTGATTCTGAGAAGAACAAAAAGAAACTCCTCTTCTCCATCTTTGCTACTCTTCTTCTTGTTACCTCAGTTGTTGCCATTAGTGTTGGAGTTAACTCTCACAAAAACTCAAACAAAAACAATGCAACCTCTTCTTCACTCTCACTCTCCCACCATTCCCACACCATAATCAAAACCGCATGCAGCTCCACATTCTACCCTGAACTATGCTTCTCAGCTATATCCTCTGAACCTGGCGTCACTCACAAAGTTTCCACTCACAAAGATGTCATTGAATTGTCCTTAAACATCACCACAAGAGCCGTTGAACACAACTTCTTCATCTTAGAGAAGCTCTTAAAAACACAAAAGGTTCTCTCAAAGAGAGAGAAAACCGCACTCCATGATTGTTTGGAGATTATAGATGAAACCCTTGATGAATTAAAAGAGGCTCGTGATGATATAAGATTATATCCTAACAAGAAAACACTGTATCAGCATGCTGATGACCTTAAAACTCTTATAAGTTCTGCCATTACTAATCAATTCACTTGCTTAGATGGTTTCTCACATGGAGATGCTGATAAGAAGGTGAGGAAGGTTCTGGAAGAAGGGCTTGTTCATGTGGAACACTTGTGCAGTAATTCATTGGCTATGACAAAGAACATGACTGATAATGACATAGCCAACTATGAACAGATGATGATGGTGGTCGGAAAGAAGAACAGAAAGCTCATGGAGGAGGTGGACACCGGGGTCAAGTGGCCGGAGTGGATTTCAACCGGAGATAGGAGGCTTTTGCAGGCGAGTTCCCAGAAAAAATATTATTCAGCGGCGGCAGTGAAGGCAGACTTAGTGGTGGCAGCGGACGGCAGTGGGGACTTCAAGACGGTGTCGGCTGCGGTGGCTGCTGCACCTGAAAAGAGTAGCAAGAGGTTTGTTATAAGAATTAAGGGTGGAGTGTATAGAGAAAATGTGGAGGTGCCAAAGAAGAAAACAAATATAATGTTCTTGGGTGATGGTAAAACTAATACTATTATCACTGGTAGCAGAAATGTTGTTGATGGTAGCACAACCTTTCACTCTGCCACTGTCGCCATAGTGGGTGGACAATTTTTAGCAAGAGATATAACCTTTCAAAACACAGCTGGTCCTTCAAAGCACCAAGCAGTAGCCCTAAGAGTTGGTGCTGACCTCTCAGCTTTCTATAACTGTGACATTCTTGCATACCAAGACACTCTTTACGTCCACAACAATCGCCAATTCTTTGTTAATTGCCTCATAGCTGGAACTGTAGATTTCATCTTTGGTAACTCAGCAGTTGTTTTCCAAAACTGTGATATCCATGCAAGACGTCCAGATTCAGGTCAAAAGAACATGGTCACTGCTCAAGGAAGAGTTGATCCTAACCAAAACACTGGCATTGTTATACAAAAGTGTAGAATTGGTGCAACTACTGATTTGGAACCTGTGAAGAAAAATTTCCCTACATATCTTGGTAGACCTTGGAAGGAGTATTCTAGAACAGTGATTATGGAAACAACAATAAGTGATGTTATTGACCCTGCTGGGTGGCATGAGTGGAATGGAAACTTTGCTTTGAATACTTTGGTTTATAGGGAATATCAGAATACCGGGCCTGGTGCTGTAACTTCAAATAGGGTTGCATGGAAAGGGTTTAAGGTTATTACTAATGTTGATGAGGCCCGGGCTTTTACTGCTGGGAGCTTTATTGCGGGCTCTAACTGGTTGTCTTCTACTGGTTTTCCTTTCACTCTTGGGCTATAA 1839 0.4198 MSKIKQFFAIVRDSDKMKQVFVGISDSEKNKKKLLFSIFATLLLVTSVVAISVGVNSHKNSNKNNATSSSLSLSHHSHTIIKTACSSTFYPELCFSAISSEPGVTHKVSTHKDVIELSLNITTRAVEHNFFILEKLLKTQKVLSKREKTALHDCLEIIDETLDELKEARDDIRLYPNKKTLYQHADDLKTLISSAITNQFTCLDGFSHGDADKKVRKVLEEGLVHVEHLCSNSLAMTKNMTDNDIANYEQMMMVVGKKNRKLMEEVDTGVKWPEWISTGDRRLLQASSQKKYYSAAAVKADLVVAADGSGDFKTVSAAVAAAPEKSSKRFVIRIKGGVYRENVEVPKKKTNIMFLGDGKTNTIITGSRNVVDGSTTFHSATVAIVGGQFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDILAYQDTLYVHNNRQFFVNCLIAGTVDFIFGNSAVVFQNCDIHARRPDSGQKNMVTAQGRVDPNQNTGIVIQKCRIGATTDLEPVKKNFPTYLGRPWKEYSRTVIMETTISDVIDPAGWHEWNGNFALNTLVYREYQNTGPGAVTSNRVAWKGFKVITNVDEARAFTAGSFIAGSNWLSSTGFPFTLGL 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1075 612 PANTHER PECTINESTERASE 29 611 - -
Lal18g1075 612 Pfam Plant invertase/pectin methylesterase inhibitor 80 236 IPR006501 GO:0004857
Lal18g1075 612 ProSitePatterns Pectinesterase signature 1. 326 345 IPR018040 -
Lal18g1075 612 ProSitePatterns Pectinesterase signature 2. 445 454 IPR033131 -
Lal18g1075 612 CDD PMEI-like_3 83 241 - -
Lal18g1075 612 Gene3D - 295 612 IPR012334 -
Lal18g1075 612 SUPERFAMILY Pectin lyase-like 295 611 IPR011050 -
Lal18g1075 612 TIGRFAM PME_inhib: pectinesterase inhibitor domain 68 240 IPR006501 GO:0004857
Lal18g1075 612 Coils Coil 151 171 - -
Lal18g1075 612 Gene3D Invertase/pectin methylesterase inhibitor family protein 76 242 IPR035513 -
Lal18g1075 612 Pfam Pectinesterase 301 597 IPR000070 GO:0030599|GO:0042545
Lal18g1075 612 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 79 241 IPR035513 -
Lal18g1075 612 PANTHER PECTINESTERASE 29 611 - -
Lal18g1075 612 SMART PMEI_2 76 236 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1075 Lal-Chr18 13816972 13823012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1075 17 612 Carbohydrate Esterase AT3G14310 67.377 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1075 K01051 - gmx:100776623 891.338
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1075 18 13816972 13823012 Lal22g0531 22 3537531 3541771 LSH