Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1072 ATGGTGGAGGATCGAAGGCTGGTGCTGATTTTGATCAGCACCTGCATTCTTGGTTTGATCCCTATTCCCACCAATGGTGACACAGATCCAAATGATGTTACTTCGCTAAAGGTCATGTTTCAAAGTATGAACTCACCATCCCAGCTAAATTGGCCTCAAAATGGTAATGATCCTTGTGGACAGTCTTGGAAAGGCATTACTTGCTCAGGCAACCGAGTCACGGAGATTAAGTTACCCGGTCTTGGACTAAGTGGAAATTTGGGTTACCAGCTACAATCCTTGACATCTGTAACCACCCTAGACTTGAGTAACAACAAACTTGGTGGAGCCATACCATACCAACTTCCTCCAAATTTGACGCGCTTAAATCTTGCTAATAATAATTTCAATGGGGCCGTCCCGTATTCTCTTACTGGAATGTCTTCTCTTACGGACCTGAATCTTGGTCATAATCAGCTCCAGCAAGCACTGAGTGTCAACTTTCAACAGCTTACTTCCTTATCTAGATTGGATCTTTCTTTCAATTCTCTGTCAGGAGATCTCCCTCAAACCTTGAGTTCACTTTCAAGCATATCTACCATGAATCTACAAAACAACCAGTTTACAGGCACCATAAACGTCCTTGCGAATCTGCCTCTTGAGAATCTGAATGTGGAAAACAATAAGTTTTCAGGCTGGATACCAGAACAGTTGAAAAGCATAAACCTAAAAACGGATGGTAATACATGGAGCTCAGGACCTGCACCCCCACCTCCTCCTGGCACACCTCCAATAACAAAACCCAACCGAGATCACAAATCTGGTGGACATAGCACCCCTTCGGATTCTGGCACAAGTGATGGGGGCAAAAAATCGGGTATAGGAGGTGGTGCCATTGCTGGAATTGTGATCTCCATCTTGGTTGTTGGGGCAATAGTGGCATTCTTTCTGGTGAAGAGAAAATCCAAGAAGCCGTCTTCAAGCATGGAAAAGCTTGACAATCAGCCCTTAGCTCCTCTTACCTCAAATGAAGTGCATGAAATGAATTATATGCAATCTTCGTCTGTAATTGATTTAAAGGCATTTGATCCTCCTCCTGCACCCCCAATAAATCTTAAGCCTCCACCTTTGGATCGTCATAAATCAGTTGATGAGGATGACTTTTCAAATAAGCCCATTATTGCCAAGAAGACCGTACCAGCTCGTGCAAACGTGAAATCGTATTCAATAGCCGACCTGCAGATTGCTACTGGAAGCTTCAGTGTAGATCAGCTTCTTGGTGAGGGTTCTTTTGGTCGTGTATACCGTGCTCATTTTGATGACGGAAAGGATTTTGCAGTGAAGAAGATAGATTCATCTGTCCTTCCCAATGTTATCTCTGAAGAGTTTACAGAAATAGTTTCAAGTATATCCCATTTGCATCATCCAAATGTTACAGAGCTTATAGGTTATTGTTCAGAGCATGGGCAACACCTCCTAGTCCATGAGTTTCACAAAAATGGATCACTGCATGACTTACTTCACCTACCTGATGAGTATAGTAAACCATTGTTATGGAACACTCGTGTCAAGATCGCTTTGGGTACTGCACGTGCCTTAGAGTACCTACACGAAGCTTGTTCACCATCTGTTGTTCACAAGAATATTAAGTCGGCCAATATACTTCTTGATACAGATTTTAATCCTCATCTTTCAGACAGCGGATTGGCAAGCTATATTCCAAATGCCAACCAGGTTTTGAACAATAATGCTGGACTTGGGTACGATGCCCCCGAAGTTGGCTTGTCTGGTCATTATAGTCTTAAGAGTGATGTATATAGCTTTGGAGTTGTCATGTTGGAACTTCTCAGTGGACGGAAACCATTTGATAGCTCAAGGCCAAGATTTGAGCAGTCTTTAGTTCGATGGGTAACACCTCAACTTCATGATATTGATGCATTGGCCAAAATGGTTGATCCTGTATTGGAAGGGCAATACCCTATTAAGTCTATTTCTCGATTTGCTGATGTTATTGCTCTTTGTGTTCAGCCGGAGCCAGAATTCCGACCACCTATGTCGGAAGTGGTTCAAGCACTGGTTCGATTAGTGCAACGAGCTAACATGAGCAAGCGAACATATGGAGCTGATCAAGGAGGATCCAACTTAGGGGGTGATGATCTAGAAGACATGTAA 2151 0.4305 MVEDRRLVLILISTCILGLIPIPTNGDTDPNDVTSLKVMFQSMNSPSQLNWPQNGNDPCGQSWKGITCSGNRVTEIKLPGLGLSGNLGYQLQSLTSVTTLDLSNNKLGGAIPYQLPPNLTRLNLANNNFNGAVPYSLTGMSSLTDLNLGHNQLQQALSVNFQQLTSLSRLDLSFNSLSGDLPQTLSSLSSISTMNLQNNQFTGTINVLANLPLENLNVENNKFSGWIPEQLKSINLKTDGNTWSSGPAPPPPPGTPPITKPNRDHKSGGHSTPSDSGTSDGGKKSGIGGGAIAGIVISILVVGAIVAFFLVKRKSKKPSSSMEKLDNQPLAPLTSNEVHEMNYMQSSSVIDLKAFDPPPAPPINLKPPPLDRHKSVDEDDFSNKPIIAKKTVPARANVKSYSIADLQIATGSFSVDQLLGEGSFGRVYRAHFDDGKDFAVKKIDSSVLPNVISEEFTEIVSSISHLHHPNVTELIGYCSEHGQHLLVHEFHKNGSLHDLLHLPDEYSKPLLWNTRVKIALGTARALEYLHEACSPSVVHKNIKSANILLDTDFNPHLSDSGLASYIPNANQVLNNNAGLGYDAPEVGLSGHYSLKSDVYSFGVVMLELLSGRKPFDSSRPRFEQSLVRWVTPQLHDIDALAKMVDPVLEGQYPIKSISRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTYGADQGGSNLGGDDLEDM 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1072 716 Gene3D Ribonuclease Inhibitor 29 249 IPR032675 -
Lal18g1072 716 Pfam Leucine rich repeat 117 177 IPR001611 GO:0005515
Lal18g1072 716 SUPERFAMILY Protein kinase-like (PK-like) 397 685 IPR011009 -
Lal18g1072 716 PRINTS Leucine-rich repeat signature 97 110 - -
Lal18g1072 716 PRINTS Leucine-rich repeat signature 164 177 - -
Lal18g1072 716 PANTHER OS01G0253100 PROTEIN 18 713 IPR045271 GO:0004714|GO:0006468
Lal18g1072 716 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Lal18g1072 716 CDD STKc_IRAK 419 688 - -
Lal18g1072 716 Pfam Protein tyrosine and serine/threonine kinase 415 685 IPR001245 GO:0004672|GO:0006468
Lal18g1072 716 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 18 713 - -
Lal18g1072 716 ProSitePatterns Protein kinases ATP-binding region signature. 419 442 IPR017441 GO:0005524
Lal18g1072 716 MobiDBLite consensus disorder prediction 245 259 - -
Lal18g1072 716 SMART LRR_typ_2 140 163 IPR003591 -
Lal18g1072 716 SMART LRR_typ_2 164 188 IPR003591 -
Lal18g1072 716 SMART LRR_typ_2 94 122 IPR003591 -
Lal18g1072 716 SUPERFAMILY L domain-like 28 232 - -
Lal18g1072 716 Gene3D Transferase(Phosphotransferase) domain 1 492 705 - -
Lal18g1072 716 ProSiteProfiles Protein kinase domain profile. 413 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1072 716 Gene3D Phosphorylase Kinase; domain 1 378 490 - -
Lal18g1072 716 MobiDBLite consensus disorder prediction 237 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1072 Lal-Chr18 13782776 13790042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1072 8 702 Strubbelig Receptor Gene Family AT1G53730 65.390 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lal18g1072 Pkinase 2.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1072 - - gmx:100780323 1066.6