Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal18g1072 | ATGGTGGAGGATCGAAGGCTGGTGCTGATTTTGATCAGCACCTGCATTCTTGGTTTGATCCCTATTCCCACCAATGGTGACACAGATCCAAATGATGTTACTTCGCTAAAGGTCATGTTTCAAAGTATGAACTCACCATCCCAGCTAAATTGGCCTCAAAATGGTAATGATCCTTGTGGACAGTCTTGGAAAGGCATTACTTGCTCAGGCAACCGAGTCACGGAGATTAAGTTACCCGGTCTTGGACTAAGTGGAAATTTGGGTTACCAGCTACAATCCTTGACATCTGTAACCACCCTAGACTTGAGTAACAACAAACTTGGTGGAGCCATACCATACCAACTTCCTCCAAATTTGACGCGCTTAAATCTTGCTAATAATAATTTCAATGGGGCCGTCCCGTATTCTCTTACTGGAATGTCTTCTCTTACGGACCTGAATCTTGGTCATAATCAGCTCCAGCAAGCACTGAGTGTCAACTTTCAACAGCTTACTTCCTTATCTAGATTGGATCTTTCTTTCAATTCTCTGTCAGGAGATCTCCCTCAAACCTTGAGTTCACTTTCAAGCATATCTACCATGAATCTACAAAACAACCAGTTTACAGGCACCATAAACGTCCTTGCGAATCTGCCTCTTGAGAATCTGAATGTGGAAAACAATAAGTTTTCAGGCTGGATACCAGAACAGTTGAAAAGCATAAACCTAAAAACGGATGGTAATACATGGAGCTCAGGACCTGCACCCCCACCTCCTCCTGGCACACCTCCAATAACAAAACCCAACCGAGATCACAAATCTGGTGGACATAGCACCCCTTCGGATTCTGGCACAAGTGATGGGGGCAAAAAATCGGGTATAGGAGGTGGTGCCATTGCTGGAATTGTGATCTCCATCTTGGTTGTTGGGGCAATAGTGGCATTCTTTCTGGTGAAGAGAAAATCCAAGAAGCCGTCTTCAAGCATGGAAAAGCTTGACAATCAGCCCTTAGCTCCTCTTACCTCAAATGAAGTGCATGAAATGAATTATATGCAATCTTCGTCTGTAATTGATTTAAAGGCATTTGATCCTCCTCCTGCACCCCCAATAAATCTTAAGCCTCCACCTTTGGATCGTCATAAATCAGTTGATGAGGATGACTTTTCAAATAAGCCCATTATTGCCAAGAAGACCGTACCAGCTCGTGCAAACGTGAAATCGTATTCAATAGCCGACCTGCAGATTGCTACTGGAAGCTTCAGTGTAGATCAGCTTCTTGGTGAGGGTTCTTTTGGTCGTGTATACCGTGCTCATTTTGATGACGGAAAGGATTTTGCAGTGAAGAAGATAGATTCATCTGTCCTTCCCAATGTTATCTCTGAAGAGTTTACAGAAATAGTTTCAAGTATATCCCATTTGCATCATCCAAATGTTACAGAGCTTATAGGTTATTGTTCAGAGCATGGGCAACACCTCCTAGTCCATGAGTTTCACAAAAATGGATCACTGCATGACTTACTTCACCTACCTGATGAGTATAGTAAACCATTGTTATGGAACACTCGTGTCAAGATCGCTTTGGGTACTGCACGTGCCTTAGAGTACCTACACGAAGCTTGTTCACCATCTGTTGTTCACAAGAATATTAAGTCGGCCAATATACTTCTTGATACAGATTTTAATCCTCATCTTTCAGACAGCGGATTGGCAAGCTATATTCCAAATGCCAACCAGGTTTTGAACAATAATGCTGGACTTGGGTACGATGCCCCCGAAGTTGGCTTGTCTGGTCATTATAGTCTTAAGAGTGATGTATATAGCTTTGGAGTTGTCATGTTGGAACTTCTCAGTGGACGGAAACCATTTGATAGCTCAAGGCCAAGATTTGAGCAGTCTTTAGTTCGATGGGTAACACCTCAACTTCATGATATTGATGCATTGGCCAAAATGGTTGATCCTGTATTGGAAGGGCAATACCCTATTAAGTCTATTTCTCGATTTGCTGATGTTATTGCTCTTTGTGTTCAGCCGGAGCCAGAATTCCGACCACCTATGTCGGAAGTGGTTCAAGCACTGGTTCGATTAGTGCAACGAGCTAACATGAGCAAGCGAACATATGGAGCTGATCAAGGAGGATCCAACTTAGGGGGTGATGATCTAGAAGACATGTAA | 2151 | 0.4305 | MVEDRRLVLILISTCILGLIPIPTNGDTDPNDVTSLKVMFQSMNSPSQLNWPQNGNDPCGQSWKGITCSGNRVTEIKLPGLGLSGNLGYQLQSLTSVTTLDLSNNKLGGAIPYQLPPNLTRLNLANNNFNGAVPYSLTGMSSLTDLNLGHNQLQQALSVNFQQLTSLSRLDLSFNSLSGDLPQTLSSLSSISTMNLQNNQFTGTINVLANLPLENLNVENNKFSGWIPEQLKSINLKTDGNTWSSGPAPPPPPGTPPITKPNRDHKSGGHSTPSDSGTSDGGKKSGIGGGAIAGIVISILVVGAIVAFFLVKRKSKKPSSSMEKLDNQPLAPLTSNEVHEMNYMQSSSVIDLKAFDPPPAPPINLKPPPLDRHKSVDEDDFSNKPIIAKKTVPARANVKSYSIADLQIATGSFSVDQLLGEGSFGRVYRAHFDDGKDFAVKKIDSSVLPNVISEEFTEIVSSISHLHHPNVTELIGYCSEHGQHLLVHEFHKNGSLHDLLHLPDEYSKPLLWNTRVKIALGTARALEYLHEACSPSVVHKNIKSANILLDTDFNPHLSDSGLASYIPNANQVLNNNAGLGYDAPEVGLSGHYSLKSDVYSFGVVMLELLSGRKPFDSSRPRFEQSLVRWVTPQLHDIDALAKMVDPVLEGQYPIKSISRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTYGADQGGSNLGGDDLEDM | 716 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal18g1072 | 716 | Gene3D | Ribonuclease Inhibitor | 29 | 249 | IPR032675 | - | |
Lal18g1072 | 716 | Pfam | Leucine rich repeat | 117 | 177 | IPR001611 | GO:0005515 | |
Lal18g1072 | 716 | SUPERFAMILY | Protein kinase-like (PK-like) | 397 | 685 | IPR011009 | - | |
Lal18g1072 | 716 | PRINTS | Leucine-rich repeat signature | 97 | 110 | - | - | |
Lal18g1072 | 716 | PRINTS | Leucine-rich repeat signature | 164 | 177 | - | - | |
Lal18g1072 | 716 | PANTHER | OS01G0253100 PROTEIN | 18 | 713 | IPR045271 | GO:0004714|GO:0006468 | |
Lal18g1072 | 716 | Pfam | Leucine rich repeat N-terminal domain | 30 | 69 | IPR013210 | - | |
Lal18g1072 | 716 | CDD | STKc_IRAK | 419 | 688 | - | - | |
Lal18g1072 | 716 | Pfam | Protein tyrosine and serine/threonine kinase | 415 | 685 | IPR001245 | GO:0004672|GO:0006468 | |
Lal18g1072 | 716 | PANTHER | STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN | 18 | 713 | - | - | |
Lal18g1072 | 716 | ProSitePatterns | Protein kinases ATP-binding region signature. | 419 | 442 | IPR017441 | GO:0005524 | |
Lal18g1072 | 716 | MobiDBLite | consensus disorder prediction | 245 | 259 | - | - | |
Lal18g1072 | 716 | SMART | LRR_typ_2 | 140 | 163 | IPR003591 | - | |
Lal18g1072 | 716 | SMART | LRR_typ_2 | 164 | 188 | IPR003591 | - | |
Lal18g1072 | 716 | SMART | LRR_typ_2 | 94 | 122 | IPR003591 | - | |
Lal18g1072 | 716 | SUPERFAMILY | L domain-like | 28 | 232 | - | - | |
Lal18g1072 | 716 | Gene3D | Transferase(Phosphotransferase) domain 1 | 492 | 705 | - | - | |
Lal18g1072 | 716 | ProSiteProfiles | Protein kinase domain profile. | 413 | 688 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lal18g1072 | 716 | Gene3D | Phosphorylase Kinase; domain 1 | 378 | 490 | - | - | |
Lal18g1072 | 716 | MobiDBLite | consensus disorder prediction | 237 | 283 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal18g1072 | Lal-Chr18 | 13782776 | 13790042 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal18g1072 | 8 | 702 | Strubbelig Receptor Gene Family | AT1G53730 | 65.390 | 0.0 | 831 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-V | Lal18g1072 | Pkinase | 2.9e-40 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal18g1072 | - | - | gmx:100780323 | 1066.6 |