Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1070 ATGACTATGATGATGAACAACAACAACAACTTTGGACAATTTGGGGATACAACTCTGACCAAGGTTTTTGTTGGGGGTCTAGCATGGGAGACTAAGAAGGAAGCTTTGAGGGAACATTTTGAGAAGTATGGTGAGATCCTTGAAGCTGTTATCATTTCTGATAAGCTAACTGGTAGATCCAAAGGCTATGGATTTGTGACGTTCAAGGAGGCTGAGGCTGCCAAGAAGGCTTGTGAGGATCAAACAACTTTGGTTATCAATGGTCGCTTAGCAAATTACAATCTGGCTTCTCTAGGAGCGCGCCGCCAGAGGTTTTCTGCTAATGCTTCACCACCACCACATTCACAACCGCAACCGCAACCACAAGAAGGATCAAACGGTGGAGGACAAAGGAATAACACATCAAGCACACAAGCTGCAAATCACGTGCAGTGGTATTATCCAGTGGGGACACCTGCTTCCCCATTCCATCATCAGACCCTACCTTACTATGGGTATACACCCACCTACATTGCACCAAACGTAAATTACAATTACAACCAGAAGCTAAGCTACGGAAGCAGTGGAGCCTACATGAGTGGGCACCACGTGTCCCATGTGTACCCAAGACATGCTATTATTGGTGGGAATACATTGATGCCAATGTACCCAATGTATCATCATCCAACGGAGACGATGGGAGTACCTGCTCAATACTTTCATCCAACGGTGGCCACTCATTTTGCGTCAGTGCCAGCACGCATCATGTCCAAACCCGTATCTATCACTCCTCATACAGGTCAGTTGGTACAGTTGAGTGCTTCAAAAGGGTCATCTGAGAGAAGCTTAGTTGGCTAA 837 0.4612 MTMMMNNNNNFGQFGDTTLTKVFVGGLAWETKKEALREHFEKYGEILEAVIISDKLTGRSKGYGFVTFKEAEAAKKACEDQTTLVINGRLANYNLASLGARRQRFSANASPPPHSQPQPQPQEGSNGGGQRNNTSSTQAANHVQWYYPVGTPASPFHHQTLPYYGYTPTYIAPNVNYNYNQKLSYGSSGAYMSGHHVSHVYPRHAIIGGNTLMPMYPMYHHPTETMGVPAQYFHPTVATHFASVPARIMSKPVSITPHTGQLVQLSASKGSSERSLVG 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1070 278 MobiDBLite consensus disorder prediction 120 137 - -
Lal18g1070 278 CDD RRM_RBM24_RBM38_like 20 96 - -
Lal18g1070 278 SMART rrm1_1 21 94 IPR000504 GO:0003723
Lal18g1070 278 Gene3D - 10 144 IPR012677 -
Lal18g1070 278 PANTHER RNA-BINDING PROTEIN ARP1-RELATED 3 262 - -
Lal18g1070 278 SUPERFAMILY RNA-binding domain, RBD 19 108 IPR035979 GO:0003676
Lal18g1070 278 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 20 98 IPR000504 GO:0003723
Lal18g1070 278 PANTHER GEO13361P1-RELATED 3 262 - -
Lal18g1070 278 MobiDBLite consensus disorder prediction 105 137 - -
Lal18g1070 278 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 22 89 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1070 Lal-Chr18 13771661 13776013 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1070 16 97 C2H2 Transcription Factor Family AT2G19380 43.902 3.06e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1070 - - lang:109337745 481.87