Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1069 ATGGCTTCTGCATGTGCTTCTTCTGCCATTGCAGCTGTTGCCATCTCTACCCCAAGGCAAGTTTCTCCACACCTACATTACTTGTATACCACTAGTATTAACCAAAATAGTAAAAAAATCAATGGAATTTCATGCAGTTCCCAGAAGAATGGATCACCCTTGGGGACTACAAAAGTTGGTTTTCTTAGTGGGAGGAAAGTGAAGGTGAACCACTTTACAGCACCAGTTGGAGGGAGATCCACCACTGCATTGTGTGCAGTAGCTGACCCTGATAGGCCTATCTGGTTCCCAGGTAGTATCCCTCCTGCATGGCTTGATGGTAGTCTCCCAGGAGACTTTGGTTTTGATCCTCTTGGTCTTTCATCTGATCCTGAGAGCCTAAGATGGAATGTTCAATCAGAACTTGTACACTGTAGATGGGCAATGTTAGGTGCTGCTGGCATCTTTATCCCAGAACTCCTAACAAAGATTGGTATCCTAAACACTCCTTCATGGTACACAGCTGGAGAACAAGAATACTTCGCAGACACAACAACCCTCTTCATAGTTGAGCTCATTTTCATTGGTTGGGTTGAGGGTAGAAGGTGGGCTGATATAATCAAACCAGGGTCTGTGAACACTGACCCTATATTTCCAAACAAGCTCACAGGCACAGATGTTGGGTACCCAGGTGGGCTTTGGTTTGACCCTCTTGGATGGGGAAGTGGTTCTCCTGAGAAGCTGAAGGAGTTGAGAACAAAGGAGATCAAGAATGGGAGATTGGCCATGTTGGCTGTAATAGGTGCATGGTTCCAGCACATTTACACTGCCACTGGTCCTATTGATAATCTCTTTGCTCATCTTGCAGATCCTGGCCATGCTACTATTTTTTCTGTAAGTTCAACCAAAAGCTAA 894 0.4519 MASACASSAIAAVAISTPRQVSPHLHYLYTTSINQNSKKINGISCSSQKNGSPLGTTKVGFLSGRKVKVNHFTAPVGGRSTTALCAVADPDRPIWFPGSIPPAWLDGSLPGDFGFDPLGLSSDPESLRWNVQSELVHCRWAMLGAAGIFIPELLTKIGILNTPSWYTAGEQEYFADTTTLFIVELIFIGWVEGRRWADIIKPGSVNTDPIFPNKLTGTDVGYPGGLWFDPLGWGSGSPEKLKELRTKEIKNGRLAMLAVIGAWFQHIYTATGPIDNLFAHLADPGHATIFSVSSTKS 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1069 297 SUPERFAMILY Chlorophyll a-b binding protein 87 292 - -
Lal18g1069 297 Gene3D Chlorophyll a/b binding protein domain 102 286 - -
Lal18g1069 297 Pfam Chlorophyll A-B binding protein 101 266 IPR022796 -
Lal18g1069 297 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 59 292 IPR001344 GO:0009765|GO:0016020
Lal18g1069 297 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 59 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1069 Lal-Chr18 13757022 13758570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1069 73 296 Chloroplast and Mitochondria Gene Families AT3G61470 85.398 3.68e-142 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1069 K08908 - gmx:100802138 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1069 18 13757022 13758570 Lal18g1069 18 13757022 13758570 ECH
Lal6g0598 6 3835828 3837395 Lal18g1069 18 13757022 13758570 LSH