Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1056 ATGGGGAAGAAGGGAAGTAGTTCTTGGTTAAATGCTGTCAAAAGGGCATTCAGATCTCCAACAAAAGATAGTGACAAAAGTAGTAGAAGAAGAGAGGACTATGATCATGAAGAAGATGAAGAGAAGAAGAGAGAAAAGAGAAGATGGATTTTCAGAAAGAATCATGAAACAGTGAACACTCAACAAACTCCAACAAAGTTGAAGCATGATGTGCCTACTACAACAAATACAAGTGTGGCTTCAAGGACAGACCAAGATCAGAAGCATGCACTTGCAATGGCTGTGGCCACCGCTGAGGCTGCTATGGCCACTGCTCAAGCTGCCGTAGAAGTTGCAAGGTTGACCAAGCCTGTTTGTACTAGTAATCATCATGCTAGGGACCATTTTGCTGCTATTATGATTCAAACTGCTTTTAGAGGATATTTGGCAAGAAGAGCGCTTCGTGCGCTTAAAGGGTTGGTGAAGTTGCAAGCTTTGGTAAGGGGCCATAATGTTAGGAAGCAGGCAAAGATGACCCTCAGGTGCATGCAGGCTTTGGTTAGAGTACAAGCAAGAGTGCTTGATCAGCGCATAAGGTCTTCACTTGACGGTAGTAGAAAATCTACCTTCAGTGACACCACCAGCGTTTGGGAATCGCGGTATCTTCAGGACATTTCAGATAGGAAATCAGTATCAAGAGAGGGAAGCAGTATTGCGGATGATTGGGATGAAAGGCCACACACGGTTGAAGAAGTTAAGGCTATGTTGCAGCAGAGGAAGGAAGCAGCTATGAAGCGAGAAAAATCCCTATCTCAAGCCTTTTCACAACAGATTTGGAGGAATGGTAGGACATCATCAATTGGAAATGAAGGTGAGCTGGAAGAGAGGCCAAAATGGCTCGACCGATGGATGGCTACAAAGCCATGGGAGGGTAGGGGAAGAGCTTCAACTGATCAAAGAGACCCCATTAAGACCGTGGAAATTGACACCGCTCAGCCTTACTCATATCTAGGAGCCAGTTACAGAAGATCACATCCAAATTATCAATATAACCCACACCACCAGCCACAAAGACATTCCATTGCTTCCCCTATCCATGGAACCCACCAAAATGGATCTATTCACCAATCCACTGCAACTCCATCTCCAGCAAAATCAAGACCCGTCCAAGTCCGGTCTGCGAGCCCTCGCTGTGTTAGAGAAGATAGAACCTTCCACACCTCCCAAACACCAAGCCTTAGGTCTACCTATAATTACACTGGGAATTTGTACCAGAATGGGAGGGCTGGAACAAGTAATGCTGCTGCTGCATTGCCTAATTACATGGCTGCAACCGAGTCCGCAAAGGCTCGAATTCGATCTCAGAGCGCTCCAAGACAGAGGCCATCAACGCCAGAGAGGGACAGAGGAGCTGGATCAGTTAAGAAAAGGCTTTCTTTCCCGGCTCCAGATCCTTATAATGCAGGAGCTGGTTATGCAAATTATGGACAAAACTTAAGGAGTCCAAGCTTCAAGAGTGTAGGTGCATCACATTTTGGTATGGAATGGCAATCCAACTACTCTTCTTGCTGCACTGAGAGTAATGGCGGAGAGATTTCTCCTTCTTCAACCGGTGACCTTAGAAGGTGGTTGAGATGA 1617 0.4595 MGKKGSSSWLNAVKRAFRSPTKDSDKSSRRREDYDHEEDEEKKREKRRWIFRKNHETVNTQQTPTKLKHDVPTTTNTSVASRTDQDQKHALAMAVATAEAAMATAQAAVEVARLTKPVCTSNHHARDHFAAIMIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRIRSSLDGSRKSTFSDTTSVWESRYLQDISDRKSVSREGSSIADDWDERPHTVEEVKAMLQQRKEAAMKREKSLSQAFSQQIWRNGRTSSIGNEGELEERPKWLDRWMATKPWEGRGRASTDQRDPIKTVEIDTAQPYSYLGASYRRSHPNYQYNPHHQPQRHSIASPIHGTHQNGSIHQSTATPSPAKSRPVQVRSASPRCVREDRTFHTSQTPSLRSTYNYTGNLYQNGRAGTSNAAAALPNYMAATESAKARIRSQSAPRQRPSTPERDRGAGSVKKRLSFPAPDPYNAGAGYANYGQNLRSPSFKSVGASHFGMEWQSNYSSCCTESNGGEISPSSTGDLRRWLR 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1056 538 Gene3D - 125 180 - -
Lal18g1056 538 ProSiteProfiles IQ motif profile. 151 178 IPR000048 GO:0005515
Lal18g1056 538 MobiDBLite consensus disorder prediction 335 382 - -
Lal18g1056 538 MobiDBLite consensus disorder prediction 55 85 - -
Lal18g1056 538 MobiDBLite consensus disorder prediction 335 408 - -
Lal18g1056 538 ProSiteProfiles IQ motif profile. 127 155 IPR000048 GO:0005515
Lal18g1056 538 Pfam Protein of unknown function (DUF4005) 388 487 IPR025064 -
Lal18g1056 538 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 171 IPR027417 -
Lal18g1056 538 PANTHER PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 1 538 - -
Lal18g1056 538 MobiDBLite consensus disorder prediction 515 538 - -
Lal18g1056 538 Pfam IQ calmodulin-binding motif 154 170 IPR000048 GO:0005515
Lal18g1056 538 Pfam IQ calmodulin-binding motif 130 148 IPR000048 GO:0005515
Lal18g1056 538 MobiDBLite consensus disorder prediction 1 85 - -
Lal18g1056 538 PANTHER IQ-DOMAIN 5-RELATED 1 538 - -
Lal18g1056 538 MobiDBLite consensus disorder prediction 440 476 - -
Lal18g1056 538 SMART iq_5 149 170 IPR000048 GO:0005515
Lal18g1056 538 SMART iq_5 126 148 IPR000048 GO:0005515
Lal18g1056 538 MobiDBLite consensus disorder prediction 18 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1056 Lal-Chr18 13590609 13593928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1056 1 538 IQD Protein Family AT1G01110 57.345 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1056 - - gmx:100786729 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1056 18 13590609 13593928 Lal18g1056 18 13590609 13593928 ECH
Lal6g0611 6 3934358 3937811 Lal18g1056 18 13590609 13593928 LSH
Lal22g0551 22 3740151 3743203 Lal18g1056 18 13590609 13593928 LSH