Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1050 ATGATGACTAGCCACATTGATAACCTTTGGGTGCTAGCCTTAGCCTCCAAATGCACACAAGAAAACGTTGCATGGTTGGTTTTATTCATGGCCTCACTGTGGTTAACCATGACTCTGTTTCACTGGTCTCACCCTGGTGGTCCTGCTTGGGGCAAGTACTATTCCACCTGGAGAAAATCCAAATCCAAATCATTATCTACTTCTTCTTATGGTACTGACCATAAAAATAACATAATGATTATTCCTGGTCCCAAAGGGTACCCTTTAATTGGAAGCATGAGTCTCATGTGTTCTCTCGCACACCATCGAATTGCAGCTGCTGCTAAAGCATGCAACGCTACGAGAATCATGGCTTTCAGCCTTGGTGACACACGTGTTATAGTCACGTGCCACCCTGATGTAGCTAAAGAGATTCTCAATAGCTCTGTTTTCGCTGATCGACCTGTTAAGGAATCAGCTTATAGTCTTATGTTCAATCGTTCAATCGGTTTCGCTCCTTATGGTGTTTATTGGAGAACTTTAAGAAGAATCGCAGCCACACATCTTTTTTGTCCAAAGCAAATCAAAGCCTCAGAAACTCAGCGAAATGAAATCGCCACACAAATGATCAACATATTCAGAAGCCACAATAACGATGGTGGTGCTATCACTGTGAGACAAGTCCTAAAGAGAGCTTCGCTTAATAACATGATGTGGTCGGTGTTTGGGCAGAGATACGAGGCGAACAGTGGAATTGAAGAAGAGTTGAGCGGGTTAGTGGAGCAAGGGTATGACCTTTTAGGTACCCTTAATTGGGGGGACCACCTTCCTTGGCTTAAGGACTTTGACTTACAAAAAATCCGGTTCACTTGCTCAAAACTCGTTCTTAGGGTGAACCGCTTTGTGGGTTCAATCATCGCTGAACATCGAGCCAACACAACACAATCCAACCACGATTTCGTTCATGTCTTGCTTTCTCTCCATGGTTCAGATAAACTATCTGATCCCGACATGATTGCTGTACTTTGGGAAATGATATTCAGAGGGACCGACACAGTAGCGGTTTTGATAGAGTGGATATTAGCAAGAATGGTGCTTCATCCAGAGATGCAGCATAAGGTGCAAGAGGAGTTGGACACTGTTACTGGTTGTGGTTCACGCGCTTTGACTGAGGAGGATACGGCGGCGATGGTTTATCTTCCGGCGGTTGTGAAGGAGGTGCTGAGGTTGCACCCGCCGGGCCCACTTCTCTCGTGGGCCCGTTTAGCCATAACTGATACGACCATTGATGGGTATCATGTGCCTGCGGGGACCACAGCTATGGTTAATATGTGGGCCATATCAAGGGACCCAGATATATGGAGGGACCCACTTGAATTTATGCCTGAGAGGTTCGTGGCTGATAAGGGGGAATTTGAGTTTTCTGTTCTCGGGTCGGATCTGAGGCTGGCTCCGTTCGGGTCGGGTAGAAGAACTTGTCCTGGGAAGAGTTTGGGTTTGGCTACTGTGAGTTTCTGGGTTGCTAGGCTTTTACATGAGTTTGAATTTCTACCTTGTGATGATGAGAATAATGGTGTTGATCTAACAGAGGTTCTTAGGCTCTCTTGTGAAATGGCTAACCCACTCTCTGTTAAGGTGCGACCCAGGCTTGGGTTAAGCTGA 1641 0.4607 MMTSHIDNLWVLALASKCTQENVAWLVLFMASLWLTMTLFHWSHPGGPAWGKYYSTWRKSKSKSLSTSSYGTDHKNNIMIIPGPKGYPLIGSMSLMCSLAHHRIAAAAKACNATRIMAFSLGDTRVIVTCHPDVAKEILNSSVFADRPVKESAYSLMFNRSIGFAPYGVYWRTLRRIAATHLFCPKQIKASETQRNEIATQMINIFRSHNNDGGAITVRQVLKRASLNNMMWSVFGQRYEANSGIEEELSGLVEQGYDLLGTLNWGDHLPWLKDFDLQKIRFTCSKLVLRVNRFVGSIIAEHRANTTQSNHDFVHVLLSLHGSDKLSDPDMIAVLWEMIFRGTDTVAVLIEWILARMVLHPEMQHKVQEELDTVTGCGSRALTEEDTAAMVYLPAVVKEVLRLHPPGPLLSWARLAITDTTIDGYHVPAGTTAMVNMWAISRDPDIWRDPLEFMPERFVADKGEFEFSVLGSDLRLAPFGSGRRTCPGKSLGLATVSFWVARLLHEFEFLPCDDENNGVDLTEVLRLSCEMANPLSVKVRPRLGLS 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1050 546 PANTHER CYTOCHROME P450 78A7-RELATED 2 543 - -
Lal18g1050 546 Coils Coil 542 546 - -
Lal18g1050 546 PRINTS P450 superfamily signature 341 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal18g1050 546 PRINTS P450 superfamily signature 395 406 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal18g1050 546 PRINTS P450 superfamily signature 477 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal18g1050 546 PRINTS P450 superfamily signature 486 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal18g1050 546 PRINTS E-class P450 group I signature 225 243 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal18g1050 546 PRINTS E-class P450 group I signature 330 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal18g1050 546 PRINTS E-class P450 group I signature 350 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal18g1050 546 PRINTS E-class P450 group I signature 394 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal18g1050 546 PRINTS E-class P450 group I signature 436 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal18g1050 546 PRINTS E-class P450 group I signature 476 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal18g1050 546 PRINTS E-class P450 group I signature 486 509 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal18g1050 546 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 479 488 IPR017972 GO:0005506|GO:0016705
Lal18g1050 546 SUPERFAMILY Cytochrome P450 81 542 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal18g1050 546 Pfam Cytochrome P450 82 516 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal18g1050 546 Gene3D Cytochrome P450 68 542 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal18g1050 546 PANTHER CYTOCHROME P450 78A6 2 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1050 Lal-Chr18 13499584 13501833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1050 2 542 Cytochrome P450 AT2G46660 66.239 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1050 K20619 - gmx:100798388 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1050 18 13499584 13501833 Lal18g1050 18 13499584 13501833 ECH
Lal6g0618 6 4001548 4003732 Lal18g1050 18 13499584 13501833 LSH
Lal22g0560 22 3826329 3830419 Lal18g1050 18 13499584 13501833 LSH