Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1030 ATGAAATGCATTGTTTTCCCCTTGCGAATGATGAATATTCAGTTCAGCTCCATCTCTTTGTTTATAAATTACAGGGATTGTTTAAGATCAAAAGTAGAAGAGGTTATGGAACAATTTAGACAGATTGGGGAGGCACTTGGAAGTTTGAAAGCTGTGATGGTATTCAGGGAGAACATTCAAATCAATCAGAGGCAGTGTTGTCTACTGCATGATGTTTTGAGCTTTGCATATGATTCTATTGCAGATGAGATTAGACAGAACCTGAAATTTGAAGAGAAGAATGGAAAGTGGAAGGTTCTTGAACAGCCATTGAGAGAGATCCATAGAGTGTTCAAAGAAGGAGAAGCTTACATTAGGCAATGCTTGGAAACAAAGGAATGGTGGGCTAAAGCCATTACCTTGTGTCACAACACAGATTGTGTTGAGTTTCACATACACAACTTGCTTTGTTGCATGCCTGTTGTAATTGAGGTTATTGAATCTGCTGCAGAAACATCAGGGTGGGATCAGGATGAAATGCAAAGAAAGAGGCTAATCAATTCCAAAAAGTACAGGAAAGAGTATAGAGACGTGAAACTTTTCCAGTGGAAATTTGGGAAACCGTACTTGATTACTCAGGATTTGTTGAACCGATATGACACGGTTTGGAAGGAAGATAGGTGGTTTCTTTTCAACAAGATTCATGAAAAGAAATTAGCAGGTGCAACAAAGTATGAGAAGAAATTAATAGATCTCCTTTTGAGGAATGTAGAAAGATCAGAATCAGTGGAAGGGAAGCTCCTGCCTAGCTCAATATTGGTTGGGTCCAAGGACTATCAGGTTAGGAGAAGAATGGGGAATGGGAGTCAGTACAAGGAGATTCAGTGGTTAAGTGAAAGCTTTGTTATGAGACAATTTTCCGGTGACGTTGAAGCTTTAGAACCTGAGATCACAGGACTTTTATCTCTTTCACATCCTAATATATTGGATTACCTTTGTGGTTTTACTGATGAGGAGAAGAAAGAGTGCTTTTTGATAATGGAACTTATGAGCAAAACCCTCAGTAGCCACATCAAAGATATTCATGGCCCAAGGAAGCGAATACCGTTCTTGCTTCATGTGGCAGTTGATATTATGCTTCAGATTGCACGAGGAATGGAATATTTGCATTCAAGGAAAGTGTATCATGGGGAACTAAGCCCTTCAAACATTTTTGTTAAGCCAAGAGGTACTTCACCAGAAGGTTACTTGCATGCCAAAGTATCAGGATTTGGCCTATCTTCTGTGAAGGACTTGAACCAGAAAGGGAACACAAATATTCAGAATGGAATTCTCCCATTCATATGGTATTCTCCAGAAGTACTTGAAGAGCAAGAACAATCAGGAGGAGGTGAAGCAAACTCCAAGTACACCGAGAAATCTGATGTGTACAGTTTTGGAATGGTTTGCTTTGAGCTTCTAACAGGTAAAGTCCCTTTTGAGGATAGTCATCTTCAAGGAGAGAAAATGAGTAGAAACATAAGGGCAGGAGAGAGACCACTTTTCCCACTCAATTCACCAAAATATGTGATCAACTTGACTAAGAAATGCTGGCATACTGACCCGAATCAACGTCCAAGCTTCTCCTCCATATGTAGAATTCTTCGTTGCGTAAAAAGGTTTCTTGCAATGAACCCTGGATACAATAGCCAGACAGAACCACCACCATTGCCGCTAGTAGATTATTGTGATGTAGAGTCGGCACTTCTGAGGAAGTTTCCTTCTTGGGCAAGTCTTGAATCATCCAAAATATCACAAATTCCATTTCAAATGTTTGCATACCGAGTTATAGAGCGTGAAAAAATAAGTATGAGCTCTAAGGAAAACTCTGAATCTGGAAGTGATGCTTCAGCCTGTGATGAACTTGTTACCTCTGGGGATGAGCCATTTCCATCCATAATTGAAAGGAAGTCTTTAGTAGTACCTGATAGTATGAACAGGAGGTTTACCACCAGGAAATCTCTAGATTTGAAGCTCACCAAACAACCAGGTACACCAAGGGTGACATCAGCTAGACCACCACAAATTTCTCCTAGTGGCCGAACTTTGAGGGCTAGTTCAGATAACCGCCTAATATCAAGTCCAAGAATGATTAGAAGAACATCCTCCGGTCATGCCTCTGATTCTGAGCTTTCTTAG 2157 0.4033 MKCIVFPLRMMNIQFSSISLFINYRDCLRSKVEEVMEQFRQIGEALGSLKAVMVFRENIQINQRQCCLLHDVLSFAYDSIADEIRQNLKFEEKNGKWKVLEQPLREIHRVFKEGEAYIRQCLETKEWWAKAITLCHNTDCVEFHIHNLLCCMPVVIEVIESAAETSGWDQDEMQRKRLINSKKYRKEYRDVKLFQWKFGKPYLITQDLLNRYDTVWKEDRWFLFNKIHEKKLAGATKYEKKLIDLLLRNVERSESVEGKLLPSSILVGSKDYQVRRRMGNGSQYKEIQWLSESFVMRQFSGDVEALEPEITGLLSLSHPNILDYLCGFTDEEKKECFLIMELMSKTLSSHIKDIHGPRKRIPFLLHVAVDIMLQIARGMEYLHSRKVYHGELSPSNIFVKPRGTSPEGYLHAKVSGFGLSSVKDLNQKGNTNIQNGILPFIWYSPEVLEEQEQSGGGEANSKYTEKSDVYSFGMVCFELLTGKVPFEDSHLQGEKMSRNIRAGERPLFPLNSPKYVINLTKKCWHTDPNQRPSFSSICRILRCVKRFLAMNPGYNSQTEPPPLPLVDYCDVESALLRKFPSWASLESSKISQIPFQMFAYRVIEREKISMSSKENSESGSDASACDELVTSGDEPFPSIIERKSLVVPDSMNRRFTTRKSLDLKLTKQPGTPRVTSARPPQISPSGRTLRASSDNRLISSPRMIRRTSSGHASDSELS 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1030 718 Pfam Protein tyrosine and serine/threonine kinase 304 540 IPR001245 GO:0004672|GO:0006468
Lal18g1030 718 MobiDBLite consensus disorder prediction 669 718 - -
Lal18g1030 718 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-LIKE 36 676 - -
Lal18g1030 718 ProSiteProfiles Protein kinase domain profile. 272 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g1030 718 Gene3D Transferase(Phosphotransferase) domain 1 268 554 - -
Lal18g1030 718 SUPERFAMILY Protein kinase-like (PK-like) 294 567 IPR011009 -
Lal18g1030 718 Pfam Protein of unknown function (DUF1221) 56 269 IPR010632 -
Lal18g1030 718 MobiDBLite consensus disorder prediction 657 718 - -
Lal18g1030 718 PANTHER SERINE-THREONINE PROTEIN KINASE 36 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1030 Lal-Chr18 13272767 13279894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1030 309 541 MAP Kinase Kinase Kinase AT5G58950 28.390 1.03e-24 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Lal18g1030 PK_Tyr_Ser-Thr 5.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1030 - - lang:109336839 1331.62