Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1028 ATGTACACCTTCTCTTGTATCACCACCACCACCCTCTTCCTTCTCTTACACCTAACCACCGCTCACCACCGTAGAATCCTCCACCAACCCTTCCTCCCACAGGACACCCTCCAACCACCGTCCCCCGCCCCGCCCAACCCCAAGTACCCATTCACCTCCACCCCCACCACCACCGCCACAACCACAAACTCTCCGCCATTCTTCCCGATATACCCTTCCCCACCTCCCCCTCCCTCCCCTTCCTCCTTCGCCTCATTCCCCGCCAATATCTCATCCCTCATCATCCCCCACTCTAAAAAATCCAATTCCTCCTCTTCCAAACTCATCGCTGCGGCCATTGTCTCCGTCGTCGCTGCTCTCTTCGTAGTTGCTATTTCCGTCTTCTTCTACTGCCGCCGACGCCGGAAAAACTACAACGCTGACGATAAAACACTTAGATCCGATTCCAGTATTCGTCTCTTCCCTCGCAGTGATAACAGCGTTGAAGCCACAGTCACTGGTAACCGTAAAGTTCGTCACACTTCCTCTACCAGCTCTGAGTTTCTCTACCTTGGTACTATTGTTAATTCTCGTGGAATCGAAGATCGTAATGATTCTCGTACCAATGGTAACTCTGGCGTTGGTTTAAATCCTCGGAAAATGGACTCGCCGGATCTCCAGCCGCTTCCGCCGTTAGCACGGCATAATACGGAGGTTCTACGGGAGGAGGTTGGTTTGGCGGCGGAGGATGAAGAAGAGGAGTTTTACTCGCCGAGAGGATCTGTAGGTGGCCGCGAAAGTTCGAACGGATCTGGTTCTAGAAGAGTGTTATCTGCCATGGCTGCTGAGAACTTCGTTGGTAGAAGCAGCGAGTCGAGCTCAAACTCCTTCTCTTCTTCCTCTTCGGCTTCGCCAGATCAGTCTCATTCAATTAGCCTGTCGCCGCCGGTGAGTATAAGCCCTAGAAAGTCGCCGGAAAATTGTCCTCCTCCGGCACAACTACCATCTGAAACACTCGCCGTCGATGTTAGAAGCTTTTCGTCTTCATCGTCACGTGCAATATACCCAGTTTACAACCAGCACGTGCAAGAATCATCATCATCATCTTCTTCTTCTTCTTCAATGTCTTCAACACCGGAACGAGAGTTTCAGTCTCAGTCACCGCTTTTTATATCACCGAATATGACACAGGAGAAAGGCTCAGATGAAAAGGCTCAGTCTAGTTTTTCATCGCCGAACAAAAACAACGTCGTTTCATCGCCGCCGAGATTATCGAACGACAGTGGAAAATCTGTTTCTTCATCTTCTACAGCTTTTTTTCTTCCATCACCGGGGAAAGTAGTTATGAATCAAAATCATCAGATTTTGGATCAGTCTCCAACAATATCAGATGTTTCAGATCGGTATGGTCATTCACCACTCTCATCATTGCCACTCTCACCATCACTGCTTTCATCACCAGAAACAGAATTGAACTCGAACCTCAACCCGAACCCGAACCATACTTCAAATCATCAATCACAGAGAAAGCACTGGGAGATTCCAGACCTATTGACACCACCCATTGTTGAATCAGTTACAGCTGAAAATGTTCCTACAAGGAAACACTGGGAGATTCCGGTTTTGCGAACGCCAATTGTTTCATCGAGTACAGTTTCTGCTCCTCCAGCTCCACCACCACCACCACCACCACCACCACCTCCTGTGTCGCGGCAGCGGAAACAGTGGGAGGTGCCTGCTGCTGCTGCTTCTTCTCCCTCAACACCTGTTGGACAACCCATTTCTAGGCTGCCAGAACTGATAACGCCTTCTAGGCCTTTTGTGTTGCAAACCCCACCAACAAAGGTTTCTCCTGTGGAGTTGCCACAGAGTTTGGGGGTGATCGATGAGAGTCTTGAGGAGGCAACTAAGCCAAAGTTGAAGCCTTTGCATTGGGATAAAGTCAGGGCCAGCTCTGATCGTGAAATGGTGTGGGATCACTTGAGGTCCAGCTCTTTCAAGTTAAATGAGGAGATGATCGAAACTTTGTTTATAGTGAATACACCAAACCCAAAACCGAAGGATAGTACTCCACGATTGGTTCTTGCCCCACCAAGTCAGGAGAATAGGGTGCTGGATCCTAAGAAGTCCCAAAATATTGCAATCTTGCTAAAAGCGCTTAATGTCACTATCGAGGAAGTGTGTGAAGCACTAATAGAAGGGATTGCTGATACACTTGGAACAGAACTACTTGAAAGCTTGTTAAAAATGGCACCGAACAAGGAAGAAGAACGTAAGTTAAAAGAATATAAAGAAGACTCGCCAACCAAGCTTGGTCCTGCTGAGAAATTTTTGAAGGCAGTGCTTGATGTACCTTTCGCATTTAAAAGGGTGGAAGCAATGCTTTACATAGCCAACTTTGAGTCAGAGATGGAATATCTTAGAAAATCCTTTCAAACTTTGGAGGATGTCAAGCTGAATCCATCAAATCATGTCCTTGTTTCTCAGGAGGTTGCCTGTGAAGAGCTGCGAAACAGTAGAATGTTCTTGAAGCTTCTAGAGGCTGTGCTTAAAACTGGGAACCGCATGAATGTGGGGACAAACCGTGGTGATGCACATGCCTTCAAGCTTGATACACTTCTCAAGCTGGTTGATGTCAAAGGTGCTGATGGGAAAACCACTCTACTGCATTTCGTGGTACAGGAAATTATTAGAACTGAAGGTGCTCGCCTCTCGGATACTAACCAAACTCCAAGCACAACTTCGAGTGACGATGCCAAGTGTAGGAGGCTTGGACTCCAAGTAGTCTCTAGTCTAAGTTCGGATCTAGGAAATGTGAAGAAGGCTGCTGCTATGGATTCTGAAGTTCTCAGCAGCGAAGTCTCTAAACTTTCCAAAGGAATTGCACACATTGCAGAGGTTGTGCAATTAATTGAAACAGCAGGGTCAGATGAAAGCAAGCAAAAGTTTACAGAATCAATGCACAAATTCATGAGAATGGCTGGGGAAGAGATTCTAAGAATTCAAGCCCAAGAAAGTGTTGCTTTATCCCTTGTGAAGGAGATTACAGAATACTTCCATGGTAACTTGTCTAAGGAAGAAGCTCATCCATTTAGAATCTTCATGGTAGTAAGAGACTTCTTAACTGTTCTTGACAGAGTTTGTAAAGAAGTTGGTATGATAAATGAGAGAACCATTGTTAGTTCTGCTCATAGGTTCCCTATTCCAGTGAACCCATTGCTTCTACAACCCCTAAACCCTATGCTTCCACAACCCCTAAACCCTATGCTTCCACAACCCCTTCCTGGGCTATACGGAAAGCGAAATCACAGTTCTTCAGATGATGATAGTCCATCTCCTTAA 3321 0.4664 MYTFSCITTTTLFLLLHLTTAHHRRILHQPFLPQDTLQPPSPAPPNPKYPFTSTPTTTATTTNSPPFFPIYPSPPPPPSPSSFASFPANISSLIIPHSKKSNSSSSKLIAAAIVSVVAALFVVAISVFFYCRRRRKNYNADDKTLRSDSSIRLFPRSDNSVEATVTGNRKVRHTSSTSSEFLYLGTIVNSRGIEDRNDSRTNGNSGVGLNPRKMDSPDLQPLPPLARHNTEVLREEVGLAAEDEEEEFYSPRGSVGGRESSNGSGSRRVLSAMAAENFVGRSSESSSNSFSSSSSASPDQSHSISLSPPVSISPRKSPENCPPPAQLPSETLAVDVRSFSSSSSRAIYPVYNQHVQESSSSSSSSSSMSSTPEREFQSQSPLFISPNMTQEKGSDEKAQSSFSSPNKNNVVSSPPRLSNDSGKSVSSSSTAFFLPSPGKVVMNQNHQILDQSPTISDVSDRYGHSPLSSLPLSPSLLSSPETELNSNLNPNPNHTSNHQSQRKHWEIPDLLTPPIVESVTAENVPTRKHWEIPVLRTPIVSSSTVSAPPAPPPPPPPPPPPVSRQRKQWEVPAAAASSPSTPVGQPISRLPELITPSRPFVLQTPPTKVSPVELPQSLGVIDESLEEATKPKLKPLHWDKVRASSDREMVWDHLRSSSFKLNEEMIETLFIVNTPNPKPKDSTPRLVLAPPSQENRVLDPKKSQNIAILLKALNVTIEEVCEALIEGIADTLGTELLESLLKMAPNKEEERKLKEYKEDSPTKLGPAEKFLKAVLDVPFAFKRVEAMLYIANFESEMEYLRKSFQTLEDVKLNPSNHVLVSQEVACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRTEGARLSDTNQTPSTTSSDDAKCRRLGLQVVSSLSSDLGNVKKAAAMDSEVLSSEVSKLSKGIAHIAEVVQLIETAGSDESKQKFTESMHKFMRMAGEEILRIQAQESVALSLVKEITEYFHGNLSKEEAHPFRIFMVVRDFLTVLDRVCKEVGMINERTIVSSAHRFPIPVNPLLLQPLNPMLPQPLNPMLPQPLPGLYGKRNHSSSDDDSPSP 1106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1028 1106 MobiDBLite consensus disorder prediction 545 565 - -
Lal18g1028 1106 Pfam Formin Homology 2 Domain 626 1037 IPR015425 -
Lal18g1028 1106 MobiDBLite consensus disorder prediction 541 586 - -
Lal18g1028 1106 MobiDBLite consensus disorder prediction 1085 1106 - -
Lal18g1028 1106 MobiDBLite consensus disorder prediction 193 226 - -
Lal18g1028 1106 MobiDBLite consensus disorder prediction 32 65 - -
Lal18g1028 1106 SUPERFAMILY Formin homology 2 domain (FH2 domain) 551 1048 - -
Lal18g1028 1106 MobiDBLite consensus disorder prediction 280 329 - -
Lal18g1028 1106 MobiDBLite consensus disorder prediction 35 51 - -
Lal18g1028 1106 MobiDBLite consensus disorder prediction 354 429 - -
Lal18g1028 1106 PANTHER FORMIN-RELATED 8 1106 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lal18g1028 1106 ProSiteProfiles Formin homology-2 (FH2) domain profile. 623 1063 IPR015425 -
Lal18g1028 1106 SMART it6_source 623 1052 IPR015425 -
Lal18g1028 1106 PANTHER FORMIN-LIKE PROTEIN 1 8 1106 - -
Lal18g1028 1106 MobiDBLite consensus disorder prediction 239 267 - -
Lal18g1028 1106 MobiDBLite consensus disorder prediction 280 314 - -
Lal18g1028 1106 MobiDBLite consensus disorder prediction 455 503 - -
Lal18g1028 1106 Gene3D Formin, FH2 domain 620 1046 IPR042201 -
Lal18g1028 1106 MobiDBLite consensus disorder prediction 455 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1028 Lal-Chr18 13264981 13269611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1028 587 1094 FH2 protein (formin) Gene Family AT3G25500 71.680 0.0 720
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1028 - - gmx:100802678 1155.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0660 6 4346290 4350967 Lal18g1028 18 13264981 13269611 LSH
Lal22g0596 22 4198893 4203224 Lal18g1028 18 13264981 13269611 LSH