Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1026 ATGAACACTCAGTCACAACAACAAAGCAAATACAACACACAAAAACTCCAACATCATGAAGAAGCAGAAGAAAACATGTTATTACATTCTGATTGCGAAACAATACCATTATCATCTCCACACTCATTACCCTCAATCTCAAACAATGCAAATGCAGAACAAGAGCAAGAAGAAGAAGAAGAAGAAGAAGAAGATGAAGATGAAGATGCTGTTTATGCAGCCAAAGACAAGGTCCATATATTTGACTTAGAGTCCGCTACAGGTGGCGCCACCGGTTCCACGGTGGTGCCACCGTTCTCATGGAAGAAGCTATGGTTGTTCACAGGGCCAGGGTTGCTTATGAGTGTAGCATTTTTGGACCCTGGGAACTTGGAAGGGGATTTACAAGCTGGTGCAGTTGCAGGGTACTCGTTGCTTTGGCTATTGATGTGGTCAACAATAATGGGTCTGCTTATACAGCTTCTGTCGGCGAGGCTAGGGGTGGCGACGGGGCGGCACCTGGCGGAGCTGTGTAGGGAGGAGTATTCAAATTGGGCAAGGTTGGTGCTTTGGTTCTTAGCAGAGTTAGCATTGATTGCTGCTGATATTCAAGAAGTTATTGGCAGTGCTATTGCTCTTAAGATTCTTAGCCATGGAATTTTACCCATTTGGGTTGGTGTCATTATCACTGCCTCAGATTGTTTCTTCTTTCTGTTTCTTGAGAACTATGGAGTGAGGAAGTTGGAAGTTTTCATTGGAACTATGGCCTTCTCTTTTGCTTGGATGTTCTTTGATACAAAGCCTAGTGAAGAAGAACTTCTGATGGGTATTTTGATCCCAAGAGTTAGTTCAAAAACACTTCGCCAAGCAGTGGAAATTGTTGGTTGTGTTATAACCCCACATAATGTTTTCCTCCATTCAGCATTAGTACAATCAAGGGACATTGATATCCATAACAAAAGCCAGGTTCAAGAGGCTATCAACTACTACTCAATTGAGTCCTCAGTTGCACTTCTAATCACTTTAGTGATCAATGTTTTCGTGATTACGGTTTTCGCAAGAGTGTTCTATGGAACAGAACAAGCCAATGACATAGGACTAGTAAATGCAGGGCAATATCTTGAGGAGAGGTATGGTGGAGGTTTGTTTCCAATTCTCTACATTTGGGGTATTGGTTTGTTAGCAGCAGGACAAAGTAGCACTATCACAGGCACATATGCAGGACAGTTTATAACAGAAGGGTTTCTGAATCTAAATATAAAGAAGTGGTTAAGGGCTTTGATTACTAGAAGTTGTGCAATTGTTCCAACTATGATTGTAGCAATTGTTTTTAATACATCAGAAGGTTCATTGGATACATTGAATGAATGGCTTAATGTGCTTCAAGCAATACAAATTCCTTTTGCACTTATCCCTCTTCTTACTTTGGTGTCCAAAGAGAAAGTCATGGGAACCTTTAGAATAGGACCTGTAGTTGAGAGGGTGTATTGGACTATATCAGTGCTGGTAATAATGGTTTATGGATATCTGTTATTAGATTTCTTCCTCTCTGAAGTGAATGGAATCCTATTTGGTTTTCTGGTCTGCCTTTGTTCTACAGCATGGATAACATTTATTGCATATCTGGTTAAACATAGTGGTGCTATTTCTTCTATGCTAGCAAGGTCCCCTAGTTCAAGAGGCTTTTTTTCTCTAGCTGGGAACTAA 1686 0.4087 MNTQSQQQSKYNTQKLQHHEEAEENMLLHSDCETIPLSSPHSLPSISNNANAEQEQEEEEEEEEDEDEDAVYAAKDKVHIFDLESATGGATGSTVVPPFSWKKLWLFTGPGLLMSVAFLDPGNLEGDLQAGAVAGYSLLWLLMWSTIMGLLIQLLSARLGVATGRHLAELCREEYSNWARLVLWFLAELALIAADIQEVIGSAIALKILSHGILPIWVGVIITASDCFFFLFLENYGVRKLEVFIGTMAFSFAWMFFDTKPSEEELLMGILIPRVSSKTLRQAVEIVGCVITPHNVFLHSALVQSRDIDIHNKSQVQEAINYYSIESSVALLITLVINVFVITVFARVFYGTEQANDIGLVNAGQYLEERYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFITEGFLNLNIKKWLRALITRSCAIVPTMIVAIVFNTSEGSLDTLNEWLNVLQAIQIPFALIPLLTLVSKEKVMGTFRIGPVVERVYWTISVLVIMVYGYLLLDFFLSEVNGILFGFLVCLCSTAWITFIAYLVKHSGAISSMLARSPSSRGFFSLAGN 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1026 561 Pfam Natural resistance-associated macrophage protein 125 482 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal18g1026 561 PRINTS Natural resistance-associated macrophage protein signature 183 209 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal18g1026 561 PRINTS Natural resistance-associated macrophage protein signature 213 232 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal18g1026 561 PRINTS Natural resistance-associated macrophage protein signature 283 306 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal18g1026 561 PRINTS Natural resistance-associated macrophage protein signature 390 409 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal18g1026 561 PRINTS Natural resistance-associated macrophage protein signature 418 435 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal18g1026 561 PRINTS Natural resistance-associated macrophage protein signature 452 471 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal18g1026 561 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 49 561 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal18g1026 561 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 102 476 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal18g1026 561 MobiDBLite consensus disorder prediction 1 69 - -
Lal18g1026 561 Hamap Divalent metal cation transporter MntH [mntH]. 90 508 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lal18g1026 561 MobiDBLite consensus disorder prediction 53 69 - -
Lal18g1026 561 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 49 561 - -
Lal18g1026 561 MobiDBLite consensus disorder prediction 14 28 - -
Lal18g1026 561 Coils Coil 43 70 - -
Lal18g1026 561 MobiDBLite consensus disorder prediction 35 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1026 Lal-Chr18 13250496 13253550 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1026 51 539 Inorganic Solute Cotransporters AT1G47240 70.949 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1026 K21398 - gmx:100801411 909.827