Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1011 ATGAGATTGAGTTGCAATGGGTGCCGCATTCTCCGGAAAGGGTGCAGCGATGACTGCATCATAAGGCCTTGCCTTGAGTGGATTAACTGTCCTGAGTCACAAGCCAATGCTACTCTCTTCCTTGCCAAATTCTATGGCCGTGCTGGATTGCTCAACCTCATCAATGCCGCTCCACAACCACTTCGTCCAGTAACATATCATTGGTTCGAGATAATGAATAAGACACTGTTCGGGATAAGTGATTCTATCCCTTAA 255 0.4667 MRLSCNGCRILRKGCSDDCIIRPCLEWINCPESQANATLFLAKFYGRAGLLNLINAAPQPLRPVTYHWFEIMNKTLFGISDSIP 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1011 84 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 66 - -
Lal18g1011 84 Pfam Lateral organ boundaries (LOB) domain 4 64 IPR004883 -
Lal18g1011 84 ProSiteProfiles LOB domain profile. 3 84 IPR004883 -
Lal18g1011 84 PANTHER LOB DOMAIN-CONTAINING PROTEIN 41-LIKE 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1011 Lal-Chr18 13116860 13117352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1011 1 63 AS2 family AT3G02550 79.365 6.00e-36 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal18g1011 LOB 1.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1011 - - sspl:121749726 122.864