Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0997 ATGGTTAAGCATAACAATGTCATCCCTAACGGACACTTCCGAAAGCATTGGCAAAACTATGTGAAGACCTGGTTCAATCAACCTGCACGCAAGACCAGAAGACGGTTAGCTCGCCAGAAGAAGGCTGTTAAGATTTTCCCCAGGCCTACAGCTGGACCTCTTAGACCTGTTGTTCATGGTCAAACTTTGAAATACAACATGAAAGTCAGAGCCGGTAGAGGATTTTCTCTTGAAGAAATTAAGGCTGCCGGTATTCCCAAAAAGCTTGCTCCAACTATTGGAATTGCTGTTGATCATCGCCGCAAGAACCGTTCTCTGGAAAGTCTGCAAGCTAATGCACAGAGGCTGAAAACATACAAAGCCAAGTTGGTTGTGTTCCCAAGACGTGCACGCAAGGTCAAGGCCGGTGATTCCACAGCTGAGGAACTTGCAAATGCCACACAAGTCCAGTGTACATACTTACCCATTACTGGGGAGAAGCCATCTGTGGAGCTTGTTAAGGTTACAGATGAGATGAAAGCGTTCAAAGCATATTACAAGCTTCGCCTCGAACGCACAAACAAGCGTCATCACGGTGCCAGACTGAAGAGGGCTGCTGAAGCAGAAAAGGAAGAGAAGAAGTGA 624 0.4663 MVKHNNVIPNGHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPVVHGQTLKYNMKVRAGRGFSLEEIKAAGIPKKLAPTIGIAVDHRRKNRSLESLQANAQRLKTYKAKLVVFPRRARKVKAGDSTAEELANATQVQCTYLPITGEKPSVELVKVTDEMKAFKAYYKLRLERTNKRHHGARLKRAAEAEKEEKK 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0997 207 Pfam Ribosomal protein L13e 7 185 IPR001380 GO:0003735|GO:0005840|GO:0006412
Lal18g0997 207 Gene3D - 167 207 - -
Lal18g0997 207 PANTHER 60S RIBOSOMAL PROTEIN L13 1 207 IPR001380 GO:0003735|GO:0005840|GO:0006412
Lal18g0997 207 ProSitePatterns Ribosomal protein L13e signature. 70 84 IPR018256 GO:0003735|GO:0005840|GO:0006412
Lal18g0997 207 MobiDBLite consensus disorder prediction 186 207 - -
Lal18g0997 207 PANTHER 60S RIBOSOMAL PROTEIN L13 1 207 - -
Lal18g0997 207 Hamap 50S ribosomal protein L13e [rpl13e]. 45 128 IPR001380 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0997 Lal-Chr18 12970166 12972676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0997 2 192 Cytoplasmic Ribosomal Protein Gene Family AT3G49010 85.864 6.64e-124 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0997 K02873 - gmx:100805957 366.311