Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0971 ATGGCCTCAAACTCAAGAAGCTCCATTATTCATGTATCTCTCATGGTAGCTTTCCTTGCAAGTAACATTGCTTTAGCAAATGACAATGTTCCCATTCCAGCTGTCAAGTCCCAATTGAACAGTTGGTACCATCAAAATGTGAAACCCTTATCTCAAAGAAAGACCACCCTAGACCCAGCACTAGTTGCTGCAGAAAGTGCAGCTACAGTTATCAAGGTCATGCAAGATGGTAGCGGGAATTTTAAGACTATCAATGAAGCCATTAAGAGCATTCCTAAAGGGAATACTAAACGTGTGATGGTGTACATTGGAAGTGGAACTTATAATGAGAAAATAAGGATTGAGAGGGAAAAACCTTTTATTACGTTGTATGGTGCTCCAGGGAAGATGCCAAACCTCACCTATGGAGGCACTGCTCTCGAATATGGCACTCTTGATAGTGCGACATTAATTGTTGAATCAGATTACTTTGTGGCTTCAAATATCATAATCTCGAATTCTGCACCAAGACCTGATGGAAAGAGGAAAGGAGCCCAAGCTGTAGCATTGAGAGCTTCTGGTGACAAAGCAACATTCTATAAAGTTACACTATTGGGATTCCAAGACACATTGTGCGATGACGCACATTGGCATATTTACAAAGATTGCTTGATTCAGGGCACCGTTGATTTTGTTTTTGGAAATGGAAAGACACTGTTTTTGAACACTGAGTTAAGAGTGCTTGGAGATGAAGGCATGTCAGTAATAACAGCACATGCAAGAGATAAGAAGACAGATGATACTGGCTACTCATTTGTTCATTGTGACGTTACTGGGACTGGGAATGGGACTCTCCTTGGAAGAGCATGGATGTCTAAATCAAAAGTGCGTCTACCGTATACAACTAGTTATGGGTTTCCAAAATACCCATAG 912 0.4101 MASNSRSSIIHVSLMVAFLASNIALANDNVPIPAVKSQLNSWYHQNVKPLSQRKTTLDPALVAAESAATVIKVMQDGSGNFKTINEAIKSIPKGNTKRVMVYIGSGTYNEKIRIEREKPFITLYGAPGKMPNLTYGGTALEYGTLDSATLIVESDYFVASNIIISNSAPRPDGKRKGAQAVALRASGDKATFYKVTLLGFQDTLCDDAHWHIYKDCLIQGTVDFVFGNGKTLFLNTELRVLGDEGMSVITAHARDKKTDDTGYSFVHCDVTGTGNGTLLGRAWMSKSKVRLPYTTSYGFPKYP 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0971 303 Gene3D - 20 297 IPR012334 -
Lal18g0971 303 PANTHER PECTINESTERASE 63-RELATED 36 294 - -
Lal18g0971 303 Pfam Pectinesterase 71 288 IPR000070 GO:0030599|GO:0042545
Lal18g0971 303 SUPERFAMILY Pectin lyase-like 67 295 IPR011050 -
Lal18g0971 303 ProSitePatterns Pectinesterase signature 2. 218 227 IPR033131 -
Lal18g0971 303 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 36 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0971 Lal-Chr18 12616859 12618316 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0971 10 294 Carbohydrate Esterase AT1G69940 54.386 9.81e-109 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0971 K01051 - gmx:100775404 418.698