Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0959 ATGATTCCAAGTGAAATGAGAGGAATCCATGAATATCAAAATTCATTCCTAGTTCCATCCAACTTTATCTTACAACAAAGTGATCACATTCCAAACTTCAACCCTAATAGTCTCTTAAACAACTTTCCAAACAACCACTACATCAGCAGCAACTCAACAACTTCTGATGAAGCTGATGAGCTTAATCTCAACATCTTTAACGAGAGGAAACAGCGGCGAATGATATCGAATAGAGAATCCGCTCGCAGATCAAGGATAAGGAAGCAAAAACAATTGGATGAACTATGGTCACATGTGGTTAGACTCAGAAATGAGAACCATAACCTTCTTGATAAACTTAACCATGTGTTTGAGTCCCATGACAAGGTTCTTCAAGAGAATGCAAGATTGAAGGAAGAAGCTTTCAATCTTCGCCAAATGGTAGAGCACATGCAAATTGGAAATTCTTTTGATTGCACATTCAGAGATTTTGATGAGGTTCCAATTAACACTCCTCAAATCAGCTGA 507 0.3787 MIPSEMRGIHEYQNSFLVPSNFILQQSDHIPNFNPNSLLNNFPNNHYISSNSTTSDEADELNLNIFNERKQRRMISNRESARRSRIRKQKQLDELWSHVVRLRNENHNLLDKLNHVFESHDKVLQENARLKEEAFNLRQMVEHMQIGNSFDCTFRDFDEVPINTPQIS 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0959 168 CDD bZIP_plant_GBF1 70 114 IPR045314 GO:0003700|GO:0006355
Lal18g0959 168 Pfam bZIP transcription factor 69 127 IPR004827 GO:0003700|GO:0006355
Lal18g0959 168 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 72 87 IPR004827 GO:0003700|GO:0006355
Lal18g0959 168 Gene3D - 67 123 - -
Lal18g0959 168 SMART brlzneu 65 129 IPR004827 GO:0003700|GO:0006355
Lal18g0959 168 Coils Coil 120 140 - -
Lal18g0959 168 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 67 130 IPR004827 GO:0003700|GO:0006355
Lal18g0959 168 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 166 IPR044521 -
Lal18g0959 168 PANTHER BZIP PROTEIN (ATBZIP48) 1 166 - -
Lal18g0959 168 SUPERFAMILY Leucine zipper domain 69 118 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0959 Lal-Chr18 12511982 12512488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0959 4 162 bZIP Transcription Factor Family AT3G30530 55.294 5.58e-49 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal18g0959 bZIP_1 3e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0959 - - gmx:100778078 210.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0959 18 12511982 12512488 Lal18g0959 18 12511982 12512488 ECH