Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0937 ATGGCGGAAGCTACATCCAAACCCGTTCCTCTTTTGAAAGACGAGTTGGATATCGTGATTCCCACGATCCGAAACCTCGATTTCTTAGAGATGTGGAGACCCTTCTTGCAGCCTTATCATCTCATCATTGTTCAGGATGGTGACCCTTCTAAGGTTATCAAAGTCCCAGAAGGTTTCGATTATGAACTCTATAACCGTAATGATATTAACCGGATCTTGGGTCCTAAGGCTTCATGCATCTCTTTTAAGGACTCTGCTTGTAGATGTTTTGGGTATATGGTGTCCAAGAAGAAGTACATCTACACCATTGATGATGATTGCTTTGTTGCTAAGGATCCATCTGGCCATGATATCAATGCTCTGGAGCAGCACATTAAGAATCTCCTTTCTCCATCCACTCCCCATTTCTTCAACACCCTTTATGATCCTTACAGAGAAGGCGCTGACTTTGTCCGTGGATACCCTTTTAGTCTTCGTGAGGGTGTGCCCACTGCTGTTTCTCATGGCCTTTGGCTTAACATACCTGATTATGACGCTCCAACTCAGCTTGTCAAGCCTCGTGAGAGGAACACCAGGTATGTTGATGCTGTTTTGACCATTCCCAAAGGAACATTGTTCCCCATGTGTGGCATGAACCTTGCTTTCGACCGTGAGCTGATTGGACCAGCAATGTACTTCGGACTCATGGGTGATGGTCAGCCTATTGGCCGATACGACGATATGTGGGCTGGCTGGTGCATTAAGGTTATCAGCGACCATTTGGACTTGGGAGTGAAGACTGGCCTTCCATACATCTGGCACAGCAAAGCTAGCAACCCATTTGTGAATCTGAAAAAGGAGTACAAAGGTATCTTCTGGCAAGAAGAAATCATTCCATTCTTCCAAAATGCCACCCTTCCAAAGGATTCCACCTCTGTTCAGCAATGCTACATTGAACTCTCCAAGCAAGTTAAGGAGAAGCTCGGCCCGATTGATCCCTATTTCGTCAAACTAGCCGACGCTATGGTTACTTGGATTGAAGCTTGGGATGAGCTTAACCCATCTGATGCAAAGCATGCTAATGGAGTTGCTGCATAG 1077 0.4578 MAEATSKPVPLLKDELDIVIPTIRNLDFLEMWRPFLQPYHLIIVQDGDPSKVIKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGHDINALEQHIKNLLSPSTPHFFNTLYDPYREGADFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPRERNTRYVDAVLTIPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCIKVISDHLDLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEEIIPFFQNATLPKDSTSVQQCYIELSKQVKEKLGPIDPYFVKLADAMVTWIEAWDELNPSDAKHANGVAA 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0937 358 Pfam Reversibly glycosylated polypeptide 12 346 IPR037595 -
Lal18g0937 358 SUPERFAMILY Nucleotide-diphospho-sugar transferases 16 224 IPR029044 -
Lal18g0937 358 PANTHER UDP-ARABINOSE MUTASE 3 353 IPR037595 -
Lal18g0937 358 PIRSF UPTG 6 350 IPR004901 GO:0016866|GO:0071669
Lal18g0937 358 PANTHER UDP-ARABINOPYRANOSE MUTASE 3 3 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0937 Lal-Chr18 12196915 12200319 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0937 K13379 - csv:101203952 687.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0937 18 12196915 12200319 Lal18g0937 18 12196915 12200319 ECH
Lal18g0937 18 12196915 12200319 Lal12g1397 12 17058079 17061579 ECH
Lal18g0937 18 12196915 12200319 Lal13g1755 13 17099348 17101914 ECH
Lal22g0685 22 4876432 4878809 Lal18g0937 18 12196915 12200319 LSH
Lal6g0776 6 5210526 5213926 Lal18g0937 18 12196915 12200319 LSH