Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0936 ATGCTCAACTCGAGGATATCCTTCTACTCCTTTTCCTCTTCTTCATTTCTTTGTATAATTTTCCTCTATACAACTCTTCTTTATGGCCTTGTTTATTCTTCTAACCATGAAGCCTCTATTCTCTTCACATGGCTTCATAGTTCTGCATCACCAACCCCTCCTTCTTTCTCTAACTGGAACATTCATGACACCAATCCATGCAAATGGACCTGCATAACATGCTCCTTACTAGGCTTTGTCACTGAGATCAACATAGAATCTATTCCTCTTCAGCTTCCAATACCATCCAATCTATCTTCATTTCCCTTTCTTAAAAAACTTGTTTTTTCTGATGCCAACCTCACTGGAACAATCCCTTTTGACATTGGTGATTGTTCTTCCCTCACTGTTTTAGACCTTAGCTCCAACAACCTTGTTGGCTCTATCCCTTCAAGTATTGGCAAGCTCAACAACCTTGTAAACTTGTCTTTAAACTCAAACCAACTCACAGGAAAAATACCAGTTGAAATAAGCAACTGCATTGGCCTTAAAAATCTTCTCCTTTTTGATAATCAACTAGGTGGGGATATTCCATATGAGCTAGGAAAGTTGTCACAACTTGAAGTCCTTAGAGCTGGTGGAAACAAAGATATAGCTGGGAAGATTCCTGAAGAGCTTGGAGAATGTAGCAATTTAACTGTGTTGGGTCTGGCTGATACAAGAATATCAGGTTCTTTGCCAACTTCATTGGGTAGACTTAACAAGCTTCAGACTTTGTCTATCTATACTACTATGTTATCTGGTGAAATTCCACCAGATTTAGGTAACTGTTCTGAACTTGTTGACTTGTTCCTCTATGAGAATAGCCTCTCAGGTTCTATTCCATCAGAGCTTGGTAAGCTTCAAAAGCTGGAACAGTTGTTTTTGTGGCAGAATAGTCTTGTTGGGGCTATACCAGAAGAGATTGGTAACTGTACAAGCTTGAGAAAATTTGATGTCTCCTTGAATTCTCTATCTGGGACTATACCTTTGTCTTTAGGGGATCTTTTGGAACTTGAGGAGTTTATGATTAGTGATAATAATGTTTCTGGTTCAATACCTTCAACTTTTTCAAATGCTAAGAATCTCCAACAGTTGCAAGTTGACACAAATCAGATCTCAGGCTTGATTCCACCAGAGCTTGGGAAGTTGTCAAATCTCTTAGTGTTCTTTGCTTGGCAGAACCAGCTTGAAGGAAGCATTCCTTCCACATTGGGAAACTGTAGTAAACTACAAGCACTAGACTTGTCTCACAATGAACTCACTGGTAGCATTCTTGGTGGCCTATTTCTGCTCCAAAATCTCACAAAGATGCTTCTGATTTCCAATGACATATCAGGTTCTATACCATCAGAAATAGGGAGTTGTGCCTCTCTTATAAGGTTGAGGCTTGGAAACAATAGGATTACTGGTAGCATTCCTAAAACAATAGGCAACCTCAAGAGCTTGAATTTCTTAGATCTCTCAAGTAACCGCCTCTCCGGGCCAGTGCCTGATGAGATTGGAAGGTGCACAGAAATTCAAATGATTGACCTTAGCAATAACAATTTAGAGGGTACACTACCTAACTCTTTGTCATCACTGTCTGCAATTCAAGTACTGGATGCATCTTCTAACAAGTTCTCTGGTCCTATAGCTTCAAGTTTGGGTCATCTTGTTTCACTAAGTAAGTTGATCCTAGGCAATAACTTGTTTTCTGGACCAATTCCAGCATCACTAAGCCTATGCTCAAATCTCCAACTTCTTGATCTTAGTAGCAATCAGTTCACTGGAAACATACCAGCTGAGCTAGGCCTTATTGAGAGTCTAGAAATTGCACTTAATCTTAGTAGAAATTCACTCGACGGCCCAATCCCACCTCAGATATCGTCTTTGAACAAGCTTTCAATACTTGACCTATCACACAATCAGTTAGAGGGAGATTTGCAACCTCTTGGACTGCTAGATAATCTTGTTTCCCTTAATGTTTCATACAATAAATTTGCTGGCCTTCTGCCGGATAACAAGCTTTTCAGGCAGTTATCATTACAAGACCTCACTGGAAATCAAGGGCTTTGCACTTCAGGTCAGGACTCATGTTTTGTATATGGTTCTGGCAAGAAAGTTATGGCATTGAATGGAAGTGGTGTGAGGAAATCGCGAATGCTTAAGCTAACGATTGGATTGCTCATAACCTTAACAGTTATAATGGTAGTTATGGGAATAACTGCTGTGATAAAAGCAAGAAGAGGGATTAGAGATGATGATTCAGAATTAGGAGGAGACTCATGGCCATGGCAATTCATACCATTCCAGAAGCTAAATTTTTCAGTAGATCAAATCCTGAGGTGCTTGGTTGATATAAATGTGATTGGGAAGGGATGCTCGGGCGTTGTTTATCGCGCTGAAATGGATAACGGTGAAGTCATTGCTGTGAAGAAACTGTGGCCAATAACAACTGAGGCAGGGGAGGCATATAAGGAAGAAAAAAGTGGAGCAAGAGACTCATTCTCAACTGAGGTGAAGACCCTTGGTTCAATCCGTCATAAGAACATTGTAAGATTCTTAGGTTGTTGCTGGAACAAAAAAACAAGATTGCTTTTCTTTGATTATATGGCTAATGGAAGTTTAAGCAGCCTACTCCATGAGAGGACTGGAAATTCTCTGGAATGGGAACTTAGGTACCGAATCTTGTTAGGCGCTGCAGAAGGCCTTGCATATCTGCATCATGATTGTGCCCCTCCAATAGTCCACAGAGATATTAAATCCAATAACATCCTCATTGGCCTTGAATTTGAGCCTTATATTGCTGACTTTGGCTTGGCTAAGCTTGTTGATGATGGTGATTTCGGTCGGTCTTCAAATACAGTAGCCGGTTCCTATGGATATATTGCCCCAGAATATGGCTATATGATGAGGATCACAGAGAAGAGTGATGTCTATAGCTATGGAATAGTTGTGTTAGAAGTCTTGACCGGTAAGCAACCAATCGATCCAACAATACCCGACGGTGTACATGTTGTTGATTGGGTGAGACAGAAAAGAGGGCTTGAAGTACTTGATCCTAGCTTACTCTCTAGACCAGAAACAGAAATAGAGGAAATGATGCAGGCATTGGGAATAGCCTTACTATGTGTAAATCCATCACCAGATGAAAGACCAACAATGAGAGATATTGTTGCAATGCTCAAGGAAATAAGGCATGAGAGGGAGGAATATGCAAAATTTGATCTGCTTCTAAAAGGGTCTCCTGCTATTGAATATAAAAGCACTTCTGGAGTTCCGGCAACAACTTCATCATTGCCAATTATGCAAAACTTAAATGCCAAAAGCAACAACACAAGCTTCTCTGTCTCTTCACTACTTCATTCATCATCTTTTCAGTGA 3384 0.4028 MLNSRISFYSFSSSSFLCIIFLYTTLLYGLVYSSNHEASILFTWLHSSASPTPPSFSNWNIHDTNPCKWTCITCSLLGFVTEINIESIPLQLPIPSNLSSFPFLKKLVFSDANLTGTIPFDIGDCSSLTVLDLSSNNLVGSIPSSIGKLNNLVNLSLNSNQLTGKIPVEISNCIGLKNLLLFDNQLGGDIPYELGKLSQLEVLRAGGNKDIAGKIPEELGECSNLTVLGLADTRISGSLPTSLGRLNKLQTLSIYTTMLSGEIPPDLGNCSELVDLFLYENSLSGSIPSELGKLQKLEQLFLWQNSLVGAIPEEIGNCTSLRKFDVSLNSLSGTIPLSLGDLLELEEFMISDNNVSGSIPSTFSNAKNLQQLQVDTNQISGLIPPELGKLSNLLVFFAWQNQLEGSIPSTLGNCSKLQALDLSHNELTGSILGGLFLLQNLTKMLLISNDISGSIPSEIGSCASLIRLRLGNNRITGSIPKTIGNLKSLNFLDLSSNRLSGPVPDEIGRCTEIQMIDLSNNNLEGTLPNSLSSLSAIQVLDASSNKFSGPIASSLGHLVSLSKLILGNNLFSGPIPASLSLCSNLQLLDLSSNQFTGNIPAELGLIESLEIALNLSRNSLDGPIPPQISSLNKLSILDLSHNQLEGDLQPLGLLDNLVSLNVSYNKFAGLLPDNKLFRQLSLQDLTGNQGLCTSGQDSCFVYGSGKKVMALNGSGVRKSRMLKLTIGLLITLTVIMVVMGITAVIKARRGIRDDDSELGGDSWPWQFIPFQKLNFSVDQILRCLVDINVIGKGCSGVVYRAEMDNGEVIAVKKLWPITTEAGEAYKEEKSGARDSFSTEVKTLGSIRHKNIVRFLGCCWNKKTRLLFFDYMANGSLSSLLHERTGNSLEWELRYRILLGAAEGLAYLHHDCAPPIVHRDIKSNNILIGLEFEPYIADFGLAKLVDDGDFGRSSNTVAGSYGYIAPEYGYMMRITEKSDVYSYGIVVLEVLTGKQPIDPTIPDGVHVVDWVRQKRGLEVLDPSLLSRPETEIEEMMQALGIALLCVNPSPDERPTMRDIVAMLKEIRHEREEYAKFDLLLKGSPAIEYKSTSGVPATTSSLPIMQNLNAKSNNTSFSVSSLLHSSSFQ 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0936 1127 Gene3D Ribonuclease Inhibitor 240 333 IPR032675 -
Lal18g0936 1127 ProSiteProfiles Leucine-rich repeat profile. 633 655 IPR001611 GO:0005515
Lal18g0936 1127 ProSiteProfiles Leucine-rich repeat profile. 416 438 IPR001611 GO:0005515
Lal18g0936 1127 Pfam Protein kinase domain 786 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0936 1127 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 19 1123 - -
Lal18g0936 1127 Pfam Leucine rich repeat N-terminal domain 35 75 IPR013210 -
Lal18g0936 1127 Gene3D Ribonuclease Inhibitor 36 148 IPR032675 -
Lal18g0936 1127 SUPERFAMILY Protein kinase-like (PK-like) 775 1062 IPR011009 -
Lal18g0936 1127 Gene3D Ribonuclease Inhibitor 434 700 IPR032675 -
Lal18g0936 1127 Gene3D Ribonuclease Inhibitor 149 239 IPR032675 -
Lal18g0936 1127 SMART serkin_6 784 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0936 1127 SUPERFAMILY L domain-like 377 719 - -
Lal18g0936 1127 SMART LRR_typ_2 438 462 IPR003591 -
Lal18g0936 1127 SMART LRR_typ_2 342 365 IPR003591 -
Lal18g0936 1127 SMART LRR_typ_2 558 582 IPR003591 -
Lal18g0936 1127 SMART LRR_typ_2 149 173 IPR003591 -
Lal18g0936 1127 SMART LRR_typ_2 486 510 IPR003591 -
Lal18g0936 1127 SMART LRR_typ_2 631 650 IPR003591 -
Lal18g0936 1127 SMART LRR_typ_2 294 318 IPR003591 -
Lal18g0936 1127 SMART LRR_typ_2 654 679 IPR003591 -
Lal18g0936 1127 ProSitePatterns Protein kinases ATP-binding region signature. 790 813 IPR017441 GO:0005524
Lal18g0936 1127 Gene3D Transferase(Phosphotransferase) domain 1 871 1079 - -
Lal18g0936 1127 SUPERFAMILY RNI-like 107 477 - -
Lal18g0936 1127 ProSitePatterns Serine/Threonine protein kinases active-site signature. 915 927 IPR008271 GO:0004672|GO:0006468
Lal18g0936 1127 Gene3D Phosphorylase Kinase; domain 1 770 870 - -
Lal18g0936 1127 ProSiteProfiles Protein kinase domain profile. 784 1070 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0936 1127 PRINTS Leucine-rich repeat signature 417 430 - -
Lal18g0936 1127 PRINTS Leucine-rich repeat signature 631 644 - -
Lal18g0936 1127 PANTHER RECEPTOR-LIKE PROTEIN KINASE 2 19 1123 - -
Lal18g0936 1127 Gene3D Ribonuclease Inhibitor 334 433 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0936 Lal-Chr18 12175457 12179632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0936 32 1118 Receptor kinase-like Gene Family AT5G56040 47.550 0.0 963
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal18g0936 Pkinase 2.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0936 - - mtr:MTR_5g045910 1781.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0777 6 5220151 5224581 Lal18g0936 18 12175457 12179632 LSH