Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0931 ATGAGTACTCTGAAGCATCTACGAGCACCAAGGCGTGTGCTTTTTACTGCCAGAAAGTATCTTAATGTGTCAGGTGTTTCCTCTCTTCACACTGGTCCGAATTGCTCGGTGGAACTTCACTCACAAGAGGAGGAAGCAGTGATAGCTTTGGGAAGTAATGTAGGTGATAGGCTACATAACTTCAAGGAAGCCTTGAAACTAATGAAGAAGTCAGGCATAAGCATCACAAGACATGCTTGTTTATATGAGACAGCACCTGCATATGTTACCGATCAACCTCGCTTCCTCAACTCTGCAGTTAGGGCTGTTACTAAACTTGGGCCACATGAATTATTGGCTGCACTAAAAAAAATTGAGAAAAACTTGGGCCGTACAGATGGTATAAGGTATGGTCCAAGGCCAATTGACTTGGACATTTTATTCTATGGTAAATTTAAAGTTGGATCTGATATTCTCACTATACCTCATGAAAGAATATGGGAACGGCCGTTTGTTATGGCCCCTTTGATGGATTTACTCGGATCAGATATTGACAGCGATACAGTTGCTAGTTGGCATTCATTTTCAGGTCATTCGGGTGGACTTTCTGGACTGTGGGAAAAATTAGGTGGTGAATCCCTTATTGGAGAGGAAGGTATGTATAGGGTAATGCCTGTTGCAAATGGCTTACTCGACTGGTCGCGCAGAACATCTGTAATGGGCGTCCTTAATTTGACCCCAGATAGTTTTAGTGATGGGGGAAATTTTCAGTCTGTGAAGTCTGCTGTTTCTCACGTCCGGTTAATGATCTCAGAGGGTGCAGATATGATTGATATAGGCGCTCAGTCTACACGACCAATGGCTTCCAGGATGTCTGTTGAAGAAGAATTAGATAGATTGATCCCTGTCCTAGAAGCTGTAACGGCAATGCCTGAGGTAGAGGGAAAGCTCATATCTGTCGGTACTTTCTACTCCGAAGTTGCTTTAGAAGCAGTTAGTAGAGGGGCTCATTTTATAAATGATGTATCTGCTGGTCAGCTGGATCCTAATATGTTTAAGGTCATTTCAGATCTCGATGTTCCTTATGTTGCAATGCACATGAGGGGTGACCCATGTACAATGCAGAACAGTGAAAACCTGAAATACGATGATGTTTGTAAAGAGGTATCGTCTGAATTATACTCACGGGTAAGAGAGGCAGAACTGTCAGGGATCCCAGCGTGGAGGATTATTATTGACCCTGGCATTGGATTCTCAAAGAAAGCTGAAGACAATCTGGACATACTCACGGGATTACCTGATATCCGAGCGGACATTGCCAAGAGAAGTCTGGCCATCTCTCATGCTCCTATACTTATCGGACCCTCGAGAAAGAGATTTGTAGGTGAAATTTGCTCTAGACCTGCTGCAGTTGAGAGAGATCCTGCTACCATTGCTTCAGTCACAGCCGGTGTTTTGGGTGGGGCTAATATTGTTAGGGTGCATAATGTCAAAGATAACCTAGATGCTGTGAAGCTTTGCGATGCGATTCTAAGACAGAAAAGCTCTCCCATGAAATTCAGGCAATGA 1548 0.4367 MSTLKHLRAPRRVLFTARKYLNVSGVSSLHTGPNCSVELHSQEEEAVIALGSNVGDRLHNFKEALKLMKKSGISITRHACLYETAPAYVTDQPRFLNSAVRAVTKLGPHELLAALKKIEKNLGRTDGIRYGPRPIDLDILFYGKFKVGSDILTIPHERIWERPFVMAPLMDLLGSDIDSDTVASWHSFSGHSGGLSGLWEKLGGESLIGEEGMYRVMPVANGLLDWSRRTSVMGVLNLTPDSFSDGGNFQSVKSAVSHVRLMISEGADMIDIGAQSTRPMASRMSVEEELDRLIPVLEAVTAMPEVEGKLISVGTFYSEVALEAVSRGAHFINDVSAGQLDPNMFKVISDLDVPYVAMHMRGDPCTMQNSENLKYDDVCKEVSSELYSRVREAELSGIPAWRIIIDPGIGFSKKAEDNLDILTGLPDIRADIAKRSLAISHAPILIGPSRKRFVGEICSRPAAVERDPATIASVTAGVLGGANIVRVHNVKDNLDAVKLCDAILRQKSSPMKFRQ 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0931 515 PANTHER FOLIC ACID SYNTHESIS PROTEIN FOL1 37 505 - -
Lal18g0931 515 TIGRFAM folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 46 172 IPR000550 GO:0003848|GO:0009396
Lal18g0931 515 CDD DHPS 230 501 IPR006390 GO:0004156|GO:0009396
Lal18g0931 515 ProSitePatterns Dihydropteroate synthase signature 1. 232 247 IPR000489 GO:0042558
Lal18g0931 515 SUPERFAMILY Dihydropteroate synthetase-like 219 506 IPR011005 GO:0044237
Lal18g0931 515 CDD HPPK 46 172 IPR000550 GO:0003848|GO:0009396
Lal18g0931 515 Gene3D - 43 187 IPR035907 -
Lal18g0931 515 PANTHER FOLATE SYNTHESIS PROTEINS 37 505 IPR045031 GO:0004156|GO:0009396
Lal18g0931 515 Pfam Pterin binding enzyme 233 488 IPR000489 GO:0042558
Lal18g0931 515 ProSitePatterns 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 129 140 IPR000550 GO:0003848|GO:0009396
Lal18g0931 515 Pfam 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 47 172 IPR000550 GO:0003848|GO:0009396
Lal18g0931 515 Gene3D - 210 511 IPR011005 GO:0044237
Lal18g0931 515 SUPERFAMILY 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK 46 176 IPR035907 -
Lal18g0931 515 ProSitePatterns Dihydropteroate synthase signature 2. 266 279 IPR000489 GO:0042558
Lal18g0931 515 TIGRFAM DHPS: dihydropteroate synthase 232 502 IPR006390 GO:0004156|GO:0009396
Lal18g0931 515 ProSiteProfiles Pterin-binding domain profile. 230 498 IPR000489 GO:0042558
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0931 Lal-Chr18 12141162 12144510 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0931 K13941 - gmx:100808899 846.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0931 18 12141162 12144510 Lal18g0931 18 12141162 12144510 ECH