Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0929 ATGAGTATAATCATGGATCTTTCTGTTGGTCACAAAAATATAGCGGAGTCGAGAATTCATGAGAGTTTGGATGAGCTAAGGACTGATTTGGCAGATTACATTGCTGAATTATCAGAGGCATTTGTGAAGGAAAGAGGATATTTTTCCATTGTTTTATCTGGTGGTTCTCTTATTGGCTTAATGGGAAAACTCTCCGAAGCACCTTATATCAAGACAGTGGATTGGTCCAAGTGGTATATATTCTGGGCTGATGAGCGTGTTGTCGCGAAAAACCATGCCGATAGCAATTATAAGCTTGCCAAAGATGGCCTTTTGTCCAAGGTGCCTATTGTCCACAGTCATGTGCATTCAATTAATGATTCAGTGTCAGCAGAAGAAGCCGCCGACGATTATGAATTTGCCATCCGGCAGTTGGTGAAAACTCGGGTGGTCAGTGTGTCTGAGATAAATGACTGCCCCAAGTTTGATCTTATTCTGCTTGGATTGGGTCAGGATGGCCATGTTGCCTCTTTATTCCCTAACCATTCAGCACTCAATGAGAGGGAAGAATGGGTAACTTTTATCACCGACTCCCCCAAACCCCCTCCTGAGAGAATCACATTCACCTTACCTGTTATCAATTCTGCATCCAATGTAGTAGTCGTCGCCACAGGCGAAAGCAAAGCGGAGGCCGCACATTTGGCAATAGATGTTGTTGCGCCAGAGTGCCCATTAATACCGGCGAGAATGGTCCAACCAGCTACGGGGAAGTTGGTGTGGTTTTTGGACAAGTCGGCTGCCTCAAAACTTGAAGATTCCAATTTGAACAACAAAGTAGGATGA 822 0.4453 MSIIMDLSVGHKNIAESRIHESLDELRTDLADYIAELSEAFVKERGYFSIVLSGGSLIGLMGKLSEAPYIKTVDWSKWYIFWADERVVAKNHADSNYKLAKDGLLSKVPIVHSHVHSINDSVSAEEAADDYEFAIRQLVKTRVVSVSEINDCPKFDLILLGLGQDGHVASLFPNHSALNEREEWVTFITDSPKPPPERITFTLPVINSASNVVVVATGESKAEAAHLAIDVVAPECPLIPARMVQPATGKLVWFLDKSAASKLEDSNLNNKVG 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0929 273 Coils Coil 23 43 - -
Lal18g0929 273 PANTHER 6-PHOSPHOGLUCONOLACTONASE 1-RELATED 5 267 - -
Lal18g0929 273 Pfam Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 23 253 IPR006148 GO:0005975
Lal18g0929 273 CDD 6PGL 24 255 IPR005900 GO:0005975|GO:0006098|GO:0017057
Lal18g0929 273 SUPERFAMILY NagB/RpiA/CoA transferase-like 18 264 IPR037171 -
Lal18g0929 273 Gene3D - 14 265 - -
Lal18g0929 273 TIGRFAM pgl: 6-phosphogluconolactonase 19 263 IPR005900 GO:0005975|GO:0006098|GO:0017057
Lal18g0929 273 PANTHER 6-PHOSPHOGLUCONOLACTONASE 5 267 IPR039104 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0929 Lal-Chr18 12131515 12137238 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0929 K01057 - gmx:100809411 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0929 18 12131515 12137238 Lal18g0929 18 12131515 12137238 ECH