Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0916 ATGACTCTTTTAGTGTACTTTGTGTTTTTTATGTTCCTTACTAGCCATTCAAGTGCAAATTACTGTCTATGCAAAGATGGTGTGGGTGATCAAGCACTTCAGAAAGCAATAGATTATGCTTGTGGTGCTGGAGCTGATTGTGCGCCTATTATGCAAAATGGACCATGTTTCCAACCAAACACTGTTAAGGATCATTGCAATTATGCTGTTAATAGCTATTTTCAGAGAAAGGGTCAAGTTCAAGGTAGCTGTGATTTTAGTGGAGCTACTACCCCTAGTGTAACTGCACCACCTACTTCAACATCTACATGTGTTTTCCCCTCAAGTCCTAGCAATGCTGGAACAAGCACCACCACAACCCCAACAACTACTACACCAGGCACATCATCATCATCTTCCACTCTAACACCACCAACAAGTACCACACCAATAGGTACATCTCCAGGAATGGGCACAGGTACAATAACAGGGAGTCCTAATGTGTTTGGAATTAGTCCAACATCTTCAACTGGCTTCACTGACCCAAACCATGGAGTGGTTAATGTGATGGGCACTAATGTATTACTATTATCTCTTGTTTTTACCTTTTGGTTACTAGCATTAAGGGTCTAA 612 0.4134 MTLLVYFVFFMFLTSHSSANYCLCKDGVGDQALQKAIDYACGAGADCAPIMQNGPCFQPNTVKDHCNYAVNSYFQRKGQVQGSCDFSGATTPSVTAPPTSTSTCVFPSSPSNAGTSTTTTPTTTTPGTSSSSSTLTPPTSTTPIGTSPGMGTGTITGSPNVFGISPTSSTGFTDPNHGVVNVMGTNVLLLSLVFTFWLLALRV 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0916 203 MobiDBLite consensus disorder prediction 91 169 - -
Lal18g0916 203 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 1 167 - -
Lal18g0916 203 Gene3D - 15 132 - -
Lal18g0916 203 Pfam X8 domain 21 90 IPR012946 -
Lal18g0916 203 SMART X8_cls 20 106 IPR012946 -
Lal18g0916 203 PANTHER BETA-1,3 GLUCANASE 1 167 IPR044788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0916 Lal-Chr18 11970065 11972127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0916 13 134 Miscellaneous Gene Families AT2G16230 36.066 3.53e-20 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0916 - - lang:109361163 254.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0916 18 11970065 11972127 Lal18g0916 18 11970065 11972127 ECH
Lal6g0797 6 5356527 5358825 Lal18g0916 18 11970065 11972127 LSH
Lal16g0803 16 5197805 5198999 Lal18g0916 18 11970065 11972127 PCT
Lal15g0773 15 5530488 5531900 Lal18g0916 18 11970065 11972127 PCT
Lal23g0828 23 10734683 10736211 Lal18g0916 18 11970065 11972127 PCT
Lal18g0916 18 11970065 11972127 Lal16g0803 16 5197805 5198999 PCT
Lal18g0916 18 11970065 11972127 Lal15g0773 15 5530488 5531900 PCT
Lal18g0916 18 11970065 11972127 Lal23g0828 23 10734683 10736211 PCT