Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0898 ATGGAAGGTAACATTAGTTCTGAACTACCACCTGGTTTCAGGTTCCACCCAACGGATGAAGAATTAATTGTACACTACCTTTGTAACCAAGCCACATCAAAGCCTTGCCCTGCTTCTATTATCCCAGAAGTTGATATCTATAAGTTTGATCCATGGGAATTGCCTGATAAATCAGACTTTGGAGAAAATGAATGGTATTTTTTTACTCCAAGGGACAGAAAGTATCCAAATGGAGTGAGGCCTAATAGAGCAACATTGTCTGGGTATTGGAAAGCAACTGGGACAGACAAAGCAATCTATAGTGGGTCTAAGCATATTGGTGTGAAGAAAGCTTTGGTTTTTTACAAGGGCAAGCCACCAAAAGGTGTTAAGACAGATTGGATTATGCATGAGTATAGATTGGTTGGATCAAGAAGACAAACCAATCGACAAATCGGATCCATGAGGCTGGATGATTGGGTCTTGTGCAGGATCTACAAGAAGAAGAACATGGGAAAATCATTGGATCAAAAAGAAGAATACCCAATAGTACAAGACAATCTAATAGGAGCAAATGATGATACTGAACAAGAAATGATAAAATTCCCAAGGACTAATTCCCTTGCTAATCTATTGGACCAGGATTACTTGGGTTCAATGTCACAGATATTAAATGATGGATCATATAACTCAACTTTTGAGTATCAAATTAACACTGCTAATGTTGGGACACACCACTTTGTTAAACCTCAACCAGTTGAATTCCCTAATCCTTATTATGCAGCAGATTTAGGGAAGTACCAAGTGAAACAGAACAGCACCATAAACCATACCTTATTTGTTAACCAAATGTATGATTAG 840 0.381 MEGNISSELPPGFRFHPTDEELIVHYLCNQATSKPCPASIIPEVDIYKFDPWELPDKSDFGENEWYFFTPRDRKYPNGVRPNRATLSGYWKATGTDKAIYSGSKHIGVKKALVFYKGKPPKGVKTDWIMHEYRLVGSRRQTNRQIGSMRLDDWVLCRIYKKKNMGKSLDQKEEYPIVQDNLIGANDDTEQEMIKFPRTNSLANLLDQDYLGSMSQILNDGSYNSTFEYQINTANVGTHHFVKPQPVEFPNPYYAADLGKYQVKQNSTINHTLFVNQMYD 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0898 279 PANTHER NAC TRANSCRIPTION FACTOR 56 1 235 - -
Lal18g0898 279 ProSiteProfiles NAC domain profile. 9 161 IPR003441 GO:0003677|GO:0006355
Lal18g0898 279 Gene3D NAC domain 18 166 IPR036093 GO:0003677|GO:0006355
Lal18g0898 279 SUPERFAMILY NAC domain 6 161 IPR036093 GO:0003677|GO:0006355
Lal18g0898 279 Pfam No apical meristem (NAM) protein 10 134 IPR003441 GO:0003677|GO:0006355
Lal18g0898 279 PANTHER NAC DOMAIN-CONTAINING PROTEIN 1 1 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0898 Lal-Chr18 11644781 11647121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0898 1 223 NAC Transcription Factor Family AT1G69490 63.830 8.50e-109 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal18g0898 NAM 2.4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0898 - - gmx:100170717 481.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0898 18 11644781 11647121 Lal18g0898 18 11644781 11647121 ECH