Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0888 ATGAATCAGCAAAATATGCAAAATCAAAGTGTGCAGTTTGTTCTGTCTACTGATGCCAAACCAAGGCTAAAGTGGACTCATGAGCTTCACCAAAGGTTCATTGAGGCAACTAATCAGCTTGGAGGAGCAGAAAAGGCAACCCCAAAGAGACTTATGAGGCTGATGGAGATTCCGGAACTTACTTTACTTGGGAAAATCCAACAGCTAGAAACCTGTTCTGACAACAAACAAGAAACCAAGAGCAGTGATGATCATTTCAACAGGGAAATCAATGTTGGTGCCCAGAATCAGATTGCTGAAAAGTTGCACATAGCTCAATCTCTTCAATTGCAAATGGAAGTACAAAGGAAATTTTATGAACAAATTGAGATTCAAAAACATTTGCAACTTAAAATTGAAGCTCAAGGGCAATATTTAGAATCAGTGCTAAAGAAGGCACAAGAAGTACAAGGTGGATACAATTCTTCAACAGTTGGAATAGAAGTCACAAAAGCTGAACTTTCTCACCTAGTTACAATAATCAACAATGATTCTCCAAGTTCTACAATCTCAGAACTGACAGAAACAAAAGCATTAAGTTTAAACTATGGGGAAAGGAAACAAGGTAGAGGGACTATGTGTTCACTTGAAAGTTCTTTGACATCTTCTGAAAGCTGTGGGAGAAAGGAAGATAAACAGTTTATGGAATCCAACAATACTATTTCACTTGAACTACCATTACTGGAAATTAAGCCTGAAGATAAAGAATCCAATGGTGCTTCAAGTAATGAAGTTAGTGGTAGAAACAGAAGTGGTGCTACTGATTCTGATGGTAGCTGTGTTGAGCAACCATGTGACAAAAAGTTGAAGAAACCCATGTTGTTGGAATTGATTGACTTAAACAACCAATATGAGAGTGACATGGAGTCTGGTTCAAAAACAACATTAGACTTAAATTGCAGTTCAAACTTTTGGGAACCATGA 963 0.3749 MNQQNMQNQSVQFVLSTDAKPRLKWTHELHQRFIEATNQLGGAEKATPKRLMRLMEIPELTLLGKIQQLETCSDNKQETKSSDDHFNREINVGAQNQIAEKLHIAQSLQLQMEVQRKFYEQIEIQKHLQLKIEAQGQYLESVLKKAQEVQGGYNSSTVGIEVTKAELSHLVTIINNDSPSSTISELTETKALSLNYGERKQGRGTMCSLESSLTSSESCGRKEDKQFMESNNTISLELPLLEIKPEDKESNGASSNEVSGRNRSGATDSDGSCVEQPCDKKLKKPMLLELIDLNNQYESDMESGSKTTLDLNCSSNFWEP 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0888 320 MobiDBLite consensus disorder prediction 300 320 - -
Lal18g0888 320 Pfam MYB-CC type transfactor, LHEQLE motif 103 148 IPR025756 -
Lal18g0888 320 MobiDBLite consensus disorder prediction 252 271 - -
Lal18g0888 320 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 20 61 IPR006447 GO:0003677
Lal18g0888 320 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 5 317 IPR044848 GO:0003700
Lal18g0888 320 SUPERFAMILY Homeodomain-like 19 62 IPR009057 -
Lal18g0888 320 Gene3D - 19 64 - -
Lal18g0888 320 MobiDBLite consensus disorder prediction 205 224 - -
Lal18g0888 320 MobiDBLite consensus disorder prediction 241 277 - -
Lal18g0888 320 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 5 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0888 Lal-Chr18 11480292 11482108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0888 11 312 G2-like Transcription Factor Family AT1G69580 42.771 8.07e-61 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal18g0888 Myb_CC_LHEQLE 8.9e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0888 - - gmx:100787178 408.297