Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0883 ATGGATACCAAGAGCCTTGTGAATGATTTTGTTTACGTTAACATGTTGTGGGCATTTGGTTCTCTTCGTATTTTCATATGCAACTATATGCTCTATTCATTAGGATTGATACTCAGATACTTCTTCAGATTTCTTAAGGTAGCAGATGCAGAAAAAGAGCTACTTAAACCGCAATCAGAAGCTGATGGGTGTGAGAGGAACATTGAGATTGATGGGTTCAGAGAGGAATTGGCCAATTTCCTGTTTTTGAGAGGGGATGATGATGGTCTTGAAGGTAGTGGAGAAAGAGAAGAAGATTCAGAAAGTTCAGATTTTATGGACAGTGTTTCTGATGTTCCTGAAGATAGTGAGAAACTAGAAGGAGAAAAAGAGTGCTTTGTTTTTAAGGAGATCCACTCTGATATTCATGAAGGTATTGAGAAAACAGAGGTATATACAGAGTGCTCTGTTTCAAAGGAGAATATTCATCAAGATGGTGATGAAAAAACAGTAGATGGTGGATCTGTTTTCATGGAGATTGATTCTTCTAGTGCTGTTTTTCATGAAGATGGAGAGAAAAGTAGAGAAGAAAATGAAGGCTTTGTTTTCGTCGAGACTAACTGTGATGTTCATCAAGATGGTAAAATAATAATTGATGAAGATGAAACAAAGAGTTCTGTTTTCAAAGAGAAAGGTTCTTCTGATCAACCTGATAGTATCACTATAGAACAAGAAGAAACTGATGAATCATTTTCTACTGAGAGTGAGTATAATGTTCATGAAGATAGTAAAAATATAGAAGAGGGTGAAACAGAGAACTCTGTTTTTATGCATAGTTGTTCTGATGTGAATGAAGGTAATAAGAAAATAGAAGAAAATGAAGAGGGGACAGTTTTTGTGGAGACAGAAACTGCAACAACCACAAGCATGTATCAATATATGTCAGGAAAAGATATCATAAGTGGGTTCATAGAAGAACCAACAGCTATGAGATTCAGCTTTAGAGAGTTTTTCATGGGTCCAGGTGTTTCACCAGTTTCTAATAATGCATGTGCCAGAACTAACATTATTCCCAACAATGTATTTTCAGAGCTTCATACAGAGAAACTTGTTCAATTCGAGAGCGAGGCGTTTGGTGAAACTGATTCATCAGATGATGAAGATAACTTTCCTTCCAATGAAAACTCTGTTGAGTCTGATTCTGAGTCAGAATCATCTACCTCAAGTGGTCTAATATGGGGAAATGGTAACAAATTTGAGGATTCATTTGAGTATCAGTTTCTGGCGAGTAATGAAGGATTTGAATCGGAACTTTTTAAGCAGATAATGAGAGAAGAAAAAATTGAATATGTGGAGGAAAAACACTTTTCATGTGGTGGAAAAGTTTCAGCTGAAGATGGGTATATAGAAATGGAAGGTAGTGTGAAAGATTTGAAGTCCTCGGATGCTTATAGTTTTGGTTACGAAGATCAAAATGATGGTTCGCGCCATGAAGAAAAGGCGTGCAGGAACGAGAAAAGTGAAGAAACAAGGTGGGAGAAGGAATTGTGTGAATCAGAATTTGATACGGAAAATGAAGATAACTTTGAATGGGAGCATGATGATTTAGTAGAACAGCTGAAAATAGAATTAAAGAATGCAAGGCAAGGAGGACTCGCCACGATTTTCGAAGAAGAGGATGAGGAGGTGGAAGAGGAGGCTCTAGAAGTAGAGCACCCCAAAGTGGTTGAAGATTTAAAGTCACTGAAAATTGGAGATAAGCTTGAATACAAGGATCAAATTGATGAAATTGGAAATGTCTATAAGAGCTATGCAGAGGAGATGAAGAAACTGGATATCTTGAATTACCAGACTATGCATGCATTAGGTCTTCTTCAACTAAAAGACCCTCTTAAACTAGTTTCAATACCAAAATCCACTATCCCAAGTGCTAAACCTGTAATCACTCAGAATTTGTGGCGACGCAAAGCATCGAAGAACACATCTGATCCATTACTTAAGATTGTTAATGAACTACATAGAGACTTGGAATTGGTCTATGTTGGTCAGGTTTGCCTCTCTTGGGAAATCTTATGTTGGCAACACAAGAAAGCCCAAGAGTTACAAGAATTTCATTCACAAGGGTGTAGGTATAATCATGTTGCTAGTGAGTTCCAACTTTTTCAAGTTCTCTTGAATAGGTTCATAGAGAATGAGCCATTTCAACAAGGTACTAGGATTCAGAATTATGTCATGAACCGTTGTGTGATTCGCAACCTGCTCCAAGTTCCAGCCATTAAAGATGATAGTATGAAAGATAGGAATATAGCTAAAGGGGATGAAAAGGATGATGCTATTTCAAGAGCAAGGTTGGTAGATATCATCAAAGAATCAATGAGTGTGTTTTGGGAATTTGTCAGAGCAGATAAAGATTATGGGAATGTGATCCTTAAAGCTTCTCAGCAGATTGGACTTGAACTCAAAGACCCTGCAACTTCATGTCTTCTAGTGGATATTAGAACCCAACTACAGAAGGCATGCTTTCTAAAGTTGAGCTTTTCATTAGCTTGGCATATCCGTAAGAAAGAGAGAAAGCTAAAGGACATAGTGAGAAGTGGGAATTGCATAGTAAGGAAGTTCCAAAAGCAGCATGAGGATGAACTTGAACATGAGCAGATGGTTGCTCAGAAAATGGTTCAGCGTCTAACCTATCGAAAGCGTCATAGTTATGCTACGAAATCCAACCAACACAGAGTGGTTAAGACCCCTGGTGGGAAGCTCGTTTATCAAACCACTAAGAAAAGGGCCAGTGGACCCAAATGCCCCGTCACTGGCAAGAGAATTCAAGGGATTCCACATTTGAGGCCTGCTGAGTATAAGAGATCAAGGTTATCTAGAAACCGTAGGACTGTGAACCGTGCATATGGAGGAGTTTTGTCCGGTGGCGCTGTTCGGGAGAGGATTATTCGAGCTTTCTTGGTTGAAGAACAAAAGATTGTTAAAAAGGTCTTGAAGATACAGAAGGCAAAGGAAAAACAGGCGTCTAAGGCCTAA 3012 0.3848 MDTKSLVNDFVYVNMLWAFGSLRIFICNYMLYSLGLILRYFFRFLKVADAEKELLKPQSEADGCERNIEIDGFREELANFLFLRGDDDGLEGSGEREEDSESSDFMDSVSDVPEDSEKLEGEKECFVFKEIHSDIHEGIEKTEVYTECSVSKENIHQDGDEKTVDGGSVFMEIDSSSAVFHEDGEKSREENEGFVFVETNCDVHQDGKIIIDEDETKSSVFKEKGSSDQPDSITIEQEETDESFSTESEYNVHEDSKNIEEGETENSVFMHSCSDVNEGNKKIEENEEGTVFVETETATTTSMYQYMSGKDIISGFIEEPTAMRFSFREFFMGPGVSPVSNNACARTNIIPNNVFSELHTEKLVQFESEAFGETDSSDDEDNFPSNENSVESDSESESSTSSGLIWGNGNKFEDSFEYQFLASNEGFESELFKQIMREEKIEYVEEKHFSCGGKVSAEDGYIEMEGSVKDLKSSDAYSFGYEDQNDGSRHEEKACRNEKSEETRWEKELCESEFDTENEDNFEWEHDDLVEQLKIELKNARQGGLATIFEEEDEEVEEEALEVEHPKVVEDLKSLKIGDKLEYKDQIDEIGNVYKSYAEEMKKLDILNYQTMHALGLLQLKDPLKLVSIPKSTIPSAKPVITQNLWRRKASKNTSDPLLKIVNELHRDLELVYVGQVCLSWEILCWQHKKAQELQEFHSQGCRYNHVASEFQLFQVLLNRFIENEPFQQGTRIQNYVMNRCVIRNLLQVPAIKDDSMKDRNIAKGDEKDDAISRARLVDIIKESMSVFWEFVRADKDYGNVILKASQQIGLELKDPATSCLLVDIRTQLQKACFLKLSFSLAWHIRKKERKLKDIVRSGNCIVRKFQKQHEDELEHEQMVAQKMVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKQASKA 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0883 1003 MobiDBLite consensus disorder prediction 86 118 - -
Lal18g0883 1003 Pfam Protein of unknown function (DUF1666) 667 887 IPR012870 -
Lal18g0883 1003 PRINTS Ribosomal protein L34 signature 896 909 IPR008195 GO:0003735|GO:0005840|GO:0006412
Lal18g0883 1003 PRINTS Ribosomal protein L34 signature 909 926 IPR008195 GO:0003735|GO:0005840|GO:0006412
Lal18g0883 1003 PRINTS Ribosomal protein L34 signature 927 937 IPR008195 GO:0003735|GO:0005840|GO:0006412
Lal18g0883 1003 PRINTS Ribosomal protein L34 signature 949 971 IPR008195 GO:0003735|GO:0005840|GO:0006412
Lal18g0883 1003 PANTHER OS09G0413600 PROTEIN 4 882 - -
Lal18g0883 1003 Gene3D - 922 1003 - -
Lal18g0883 1003 Pfam Ribosomal protein L34e 884 979 IPR008195 GO:0003735|GO:0005840|GO:0006412
Lal18g0883 1003 MobiDBLite consensus disorder prediction 387 405 - -
Lal18g0883 1003 MobiDBLite consensus disorder prediction 246 264 - -
Lal18g0883 1003 PANTHER FINGER FYVE DOMAIN PROTEIN, PUTATIVE (DUF1666)-RELATED 4 882 - -
Lal18g0883 1003 MobiDBLite consensus disorder prediction 214 266 - -
Lal18g0883 1003 Gene3D - 884 920 - -
Lal18g0883 1003 ProSitePatterns Ribosomal protein L34e signature. 898 911 IPR018065 -
Lal18g0883 1003 MobiDBLite consensus disorder prediction 370 405 - -
Lal18g0883 1003 MobiDBLite consensus disorder prediction 92 110 - -
Lal18g0883 1003 MobiDBLite consensus disorder prediction 372 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0883 Lal-Chr18 11407963 11414564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0883 884 1002 Cytoplasmic Ribosomal Protein Gene Family AT1G69620 92.437 7.89e-70 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0883 - - lang:109359161 1055.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0883 18 11407963 11414564 Lal18g0883 18 11407963 11414564 ECH