Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0877 ATGAACGTGGATCTGGAATCATTAGCAGAGGCCACATCAGGGGCCATAGGATCATTACTCAGCACAACAATTCTGTACCCTCTCGATATCTGCAAGACCAAGTACCAAGCTGAAGCTCGTTCCCATCATCACCAAAAATACAAAAATCTCTCTGATGTGTTATGGGAGGCCATATCTACTCGTCAGCTTCTTTCGCTTTACCAGGGCCTTGGAACAAAGAATCTTCAATCCTTCATTTCACAGTTTGTTTACTTCTATGGCTACAGCTACTTTAAAAGACTGTATCTGAAGAGAAGTGGTTATAAGTCTATTGGAACCTCAGCAAATTTGGTAATTGCTGCTGCTGCTGGGGCTTGCACAGCGATTGCGACTCAGCCCCTGGATACAGCCTCTTCAAGGATGCAGACAAGTGCCTTTGGAAAGTCTAAAGGGCTATTGAAAACCCTTACAGAAGGCAATTGGAGTGATGCTTTTGATGGCCTTAGCATTTCCTTGCTGCTGACCTCAAACCCCGCAATTCAGTATACAGTTTTTGATCAGCTGAAACATCGAGTGCTGAAGAATAAACCAAATAAAGATGATAAAACTGTATCACCAGCATCCCTTTCTGCATTTATGGCCTTTCTTATAGGCGCAGTTTCGAAGAGTATTGCTACTGTTATAACATATCCCGCTATCAGGTGCAAGGTCATCATTCAAGCTGCAGACTCGGATGAAGCAACCTCTGAATCAAAGGTGAAATCGCAGAAAACAGTGCCCGGAGTTCTCTACGGAATATGGAAAAGTGAGGGCATATTAGGATTTTTCAAAGGATTGCATGCTCAAATCTTAAAAACTGTTTTGAGCTCAGCACTGCTTTTAATGATCAAGGAAAAGATCTCTGCCACTACTTGGGTGCTTATACTTGCAGTTAAAAGGTATCTTTTACTCCCAAGGGGTAAGATAAAAAACACGTAA 957 0.4232 MNVDLESLAEATSGAIGSLLSTTILYPLDICKTKYQAEARSHHHQKYKNLSDVLWEAISTRQLLSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLKRSGYKSIGTSANLVIAAAAGACTAIATQPLDTASSRMQTSAFGKSKGLLKTLTEGNWSDAFDGLSISLLLTSNPAIQYTVFDQLKHRVLKNKPNKDDKTVSPASLSAFMAFLIGAVSKSIATVITYPAIRCKVIIQAADSDEATSESKVKSQKTVPGVLYGIWKSEGILGFFKGLHAQILKTVLSSALLLMIKEKISATTWVLILAVKRYLLLPRGKIKNT 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0877 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 5 94 IPR018108 -
Lal18g0877 318 PRINTS Mitochondrial carrier protein signature 20 38 IPR002067 GO:0055085
Lal18g0877 318 PRINTS Mitochondrial carrier protein signature 67 85 IPR002067 GO:0055085
Lal18g0877 318 PRINTS Mitochondrial carrier protein signature 113 135 IPR002067 GO:0055085
Lal18g0877 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 202 296 IPR018108 -
Lal18g0877 318 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 1 317 IPR045900 GO:0005347|GO:0006635|GO:0015217
Lal18g0877 318 Gene3D Mitochondrial carrier domain 3 297 IPR023395 -
Lal18g0877 318 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE CARRIER 1 1 317 - -
Lal18g0877 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 184 IPR018108 -
Lal18g0877 318 SUPERFAMILY Mitochondrial carrier 7 292 IPR023395 -
Lal18g0877 318 Pfam Mitochondrial carrier protein 202 294 IPR018108 -
Lal18g0877 318 Pfam Mitochondrial carrier protein 6 98 IPR018108 -
Lal18g0877 318 Pfam Mitochondrial carrier protein 103 188 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0877 Lal-Chr18 11298882 11302145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0877 23 311 Chloroplast and Mitochondria Gene Families AT1G25380 26.557 5.48e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0877 - - gmx:100301879 535.028