Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0868 ATGCCACTTCATTTGATGTCCTATGTTGATGTTTCATCTGCCAAGGTATTGCAAGAGACTTGCAACTACATCCAGAATTTGCACAGAGAGGTTGATGATCTAAGTGACCGATTGTCACAACTTTTGGCCAACACAGAGTCCAATAGTGCTCAAGCAGCCATTATTAGGAGCTTACTTATGATCAAATACTTTTCAAATTTGGAGGCTGCAAATGCTTGGGGGTTTACTCTTAGTAATTTTTTGCGTGGAAGGTGGATTCATTTAGAAGAGTCACGCTTGATGCTGACATTGCCTATTACATTAGACATTACGCCTTGA 318 0.4025 MPLHLMSYVDVSSAKVLQETCNYIQNLHREVDDLSDRLSQLLANTESNSAQAAIIRSLLMIKYFSNLEAANAWGFTLSNFLRGRWIHLEESRLMLTLPITLDITP 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0868 105 Coils Coil 24 44 - -
Lal18g0868 105 PANTHER TRANSCRIPTION FACTOR PRE6 10 60 - -
Lal18g0868 105 PANTHER TRANSCRIPTION FACTOR PRE 10 60 IPR044293 GO:0006355|GO:0040008|GO:0046983
Lal18g0868 105 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 11 49 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0868 Lal-Chr18 11207902 11208826 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0868 11 59 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G74500 77.551 3.36e-20 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0868 - - gmx:100816720 93.2041