Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0845 ATGGGGTTGGGTGGTGTTGAGAATGGTAATAAGGTGGTGGAGTCTTGGGATGTGAGTAAATCAAAGGGAAGGAGGAAGAAGAAGAAAGAAGATGATGTAGATGTAGTGGTGGAGGAAGAAGAAGATATTGGGTGTTGGGTTAGGTTGAGGTTATTTGGTAGCTGCATTTCTTCAAGATCCAATGTTGATGGCTCACTCAGTGGCACCAACACTCATTATGCTGAAAGTAAATCAAGTAAATCAACTAATGACACTAGTAGAGACCAACCAACAGTTCCTGTAGTGTCTTCTACATCTACTAGTAATACAAGCAATTCGTCGAGTTCAAAACTTGAAGAAGAGCTTAAAGTTTCTTCCAGGCTGCGAAAGTTCGCTTTCAATGATCTTAAGTTGGCAACAAGAAATTTTCGGCCTGAAAGTCTTCTTGGTGAAGGTGGGTTTGGTTGTGTATTCAAGGGGTGGATAGAAGAAAATGGAACTGCTCCAGTGAAACCTGGAACTGGGTTAACTGTTGCTGTAAAAACACTCAATCATGATGGGCTCCAGGGTCATAAAGAGTGGCTGGCTGAAGTAAATTTTCTTGGTGATCTAGTTCATCCAAACCTTGTTAAGCTTATAGGATACTGCATTGAAGATGATCAAAGGTTGTTAGTGTATGAGTTCATGCCTCGGGGAAGCCTTGAAAACCATTTGTTTAGGAGATCTCTGCTACTTCCATGGTCCATTAGGATGAAAATTGCACTAGGAGCTGCTAAGGGTCTTGCTTTCCTTCATGAAGAAGCTGAACGACCAGTAATATATAGAGATTTTAAAACTTCAAACATACTATTAGATGCAGAGTACAATGCCAAGCTCTCAGACTTTGGTCTTGCCAAAGATGGTCCAGAAGGTGATAAAACCCACGTGTCTACTCGAGTGATGGGAACATATGGATATGCAGCACCAGAATATGTCATGACAGGACATCTTACATCAAAAAGTGATGTGTACAGTTTCGGAGTGGTACTACTTGAGATGTTGACTGGCAGAAGATCTATGGACAAACACCGTCCCAATGGTGAACACAACCTTGTGGAATGGGCTCGACCACATCTAGGAGAGAGAAGAAGGTTCTACAGGCTCATAGACCCTCGTCTTGAAGGTCACTTTTCCATAAAAGGAGCTCAGAAAGCTGCGCAGGTGGCTTCTCTTTGCCTTAGTAGAGATCTGAAAGCCCGACCGTCAATGAGTGAAGTTGTGGAAGCTTTAAAGCCTCTACCTAACCTTAAGGACATGGCAAGCTCTTCCTATTATTTTCAAACAATGCAAGCTGACCGCTTTCGAGCAAGCCCGAATGGTAGAAACGGGCAGACACAAGGAGGAGCATTGCTCACCCGGAATTGGCAGCAGCAAAGGAGCCTTTCAACACCAAATGGTACTCATGTCTCTCCATATCATCATCAGTATCCCCAACAATCACCAAAACCCAATGCCAAAGCATAG 1482 0.4325 MGLGGVENGNKVVESWDVSKSKGRRKKKKEDDVDVVVEEEEDIGCWVRLRLFGSCISSRSNVDGSLSGTNTHYAESKSSKSTNDTSRDQPTVPVVSSTSTSNTSNSSSSKLEEELKVSSRLRKFAFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLLLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKHRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQVASLCLSRDLKARPSMSEVVEALKPLPNLKDMASSSYYFQTMQADRFRASPNGRNGQTQGGALLTRNWQQQRSLSTPNGTHVSPYHHQYPQQSPKPNAKA 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0845 493 SUPERFAMILY Protein kinase-like (PK-like) 112 416 IPR011009 -
Lal18g0845 493 MobiDBLite consensus disorder prediction 463 493 - -
Lal18g0845 493 Pfam Protein tyrosine and serine/threonine kinase 140 416 IPR001245 GO:0004672|GO:0006468
Lal18g0845 493 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 70 483 - -
Lal18g0845 493 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Lal18g0845 493 ProSitePatterns Protein kinases ATP-binding region signature. 142 174 IPR017441 GO:0005524
Lal18g0845 493 MobiDBLite consensus disorder prediction 66 112 - -
Lal18g0845 493 Gene3D Phosphorylase Kinase; domain 1 95 221 - -
Lal18g0845 493 PANTHER OS01G0588500 PROTEIN-RELATED 70 483 - -
Lal18g0845 493 MobiDBLite consensus disorder prediction 17 34 - -
Lal18g0845 493 CDD STKc_IRAK 142 419 - -
Lal18g0845 493 Gene3D Transferase(Phosphotransferase) domain 1 222 437 - -
Lal18g0845 493 ProSiteProfiles Protein kinase domain profile. 136 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0845 493 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0845 Lal-Chr18 10983742 10987530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0845 103 416 Glycoside Hydrolase AT3G07070 55.799 2.11e-116 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lal18g0845 PK_Tyr_Ser-Thr 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0845 - - gmx:100807510 823.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0845 18 10983742 10987530 Lal18g0845 18 10983742 10987530 ECH