Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0841 ATGGAGGCAGATATTTGTGCAGCATGCAACTGCCACCGTAATTTCCACCGGATGGAGATCAACGGTGTCGTCAACATGAACTCATACCTGCACCAGCCTTGGCCGCAGCCACAACCACCGTTGCACACTTGCTGCCATCATATGCTACCACCACCTCCCATCGGTTACCACCGCCACCACATAGTGGCAGCTTCACCGGTGTCCCAACATCGCCCCATTGCACTTCCCACCGCATCCGGTGGAGATTTCAGCTGTGAAGAGGGGGACATGTTGAACCGTAACAACAACGATGATGGAGGGAAAGTGAAGAAGAGGTTTAGGACTAAATTCACCACAGAGCAGAAGGATAAGATGCTTGCATTTGCTGAGAAGCTTGGATGGAAAATCCATAAACATGATGCTACTGCTGTGGAGCAATTCTGTGCCGAGACTAGTGTGAAGAGACAAGTGCTGAAGGTGTGGATGCACAACCACAAAGGGAAGAAATCTTAG 492 0.5041 MEADICAACNCHRNFHRMEINGVVNMNSYLHQPWPQPQPPLHTCCHHMLPPPPIGYHRHHIVAASPVSQHRPIALPTASGGDFSCEEGDMLNRNNNDDGGKVKKRFRTKFTTEQKDKMLAFAEKLGWKIHKHDATAVEQFCAETSVKRQVLKVWMHNHKGKKS 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0841 163 SUPERFAMILY Homeodomain-like 95 161 IPR009057 -
Lal18g0841 163 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 103 159 IPR006455 -
Lal18g0841 163 Gene3D - 89 163 - -
Lal18g0841 163 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 1 3 159 - -
Lal18g0841 163 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 3 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0841 Lal-Chr18 10911084 10911575 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0841 1 159 ZF-HD Transcription Factor Family AT4G24660 44.512 4.04e-36 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lal18g0841 ZF-HD_dimer 5.7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0841 - - lang:109327886 248.054