Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0815 ATGCCTTTCACCAACCCAATGAATTCTACTCTAACCGTCACCGCCACGGCGCAAATGCCGTTTCTCAAACCGTTCCACCGCCACTTCACCGCACCTCCTCACAACCTCCTCCTCCTCCGCCGCAACAACCTCGAACACGTTGTTGCTTCTTACAACAACAGCTCTCACTGCATATCCACCTCCTTCGTTTCTGTTTCGTCGTCACGCTCGCTCTGTGCTTTCAGTTCACTTCTCCGACGAACGCCGTGCCGTCTGCGGTGCGTTTCAAGCTCCGACGCTTCCTTTGCTTCTTCCACCGGCGGTGGAAATGGCGGCGATGGAGCTTCCGGTGGCAGCGGCGGAGGTGGTGGTGGTTATGGCGGTGAGTCTGGTGATGGTAGTGTTAAATTGGTTGTAGACGCGGCGGCTCAGGATATTTCAGCAATTTCGCCTGATGTTATTATTTTAGATGTTTCGGGAATGGTGTGTGGTGGATGCGCAGCGAATGTGAAAAGGATCCTGGAAAGTCAACCACAAGTATCATCGGCTAGTGTAAATCTAACAACAGAGACAGCAATAGTTTGGCCTGTATCTGAAGCAAAGACTGCACCAAATTGGAAAAAGCAATTAGGAGAGGAACTTGCAGAGCATTTAACTGGCTGTGGTTTTAATTCTAGCCTTCGAGATTCAGTAAGAGACAATTTCTTCCAAATTTTTCAAAGGAAGATGGAGGAAAAGCGTAAACAATTAAGAGAAAGTGGTTGCGAGTTAGCTGTTTCTTGGGCCCTATGTGCTGTCTGTCTTGTTGGCCATCTTTCTCATTTCTTTGCAGCGAAGGCACCATGGATCCATGCATTTCATTCCACTGGATTTCATATGTCGTTGTCATTGTTTACGCTGCTTGGTCCTGGCCGTCAACTTATCCTTGATGGTTTGAAAAGTCTTCTTAAAAGGGCTCCAAACATGAACACCTTAGTTGCTCTTGGGGCTTTATCATCATTTACAGTCAGTTCATTTGCTGCATTTCTGCCAAAATTGGGTTGGAAGGCTTTCTTCGAGGAACCAATTATGTTAATTGCATTTGTCTTGTTAGGAAGGAATCTTGAACAGAGAGCTAAAATTAAAGCAACCAGTGATATGACAGGACTTCTTAGTATGCTGCCATCAAAAGCTCGCCTTCTAGTTAACAATGGGGTAACAGAAGTTGGCTCAATTGTTGAAGTTCCATCTGACAGTCTTTCTGTTGGAGATCAGATTATTGTTTTACCTGGAGACCGTATTCCAGCAGATGGAGTTGTCCGAGCTGGTAGAAGCACTGTAGATGAATCAAGTTTCACTGGGGAGCCACTTCCAGTAACAAAACTACCTGGGAGTGAGGTCGCAGCTGGAAGTATAAATATTAATGGAACTCTTACATTGGAAGTGCGGAGACCAGGTGGTGAGACTGCTATGGGGGACATTGTTCGCCTAGTTGAGGAGGCACAAAGTAGGGAAACTCCAGTACAACGGTTGGCTGACAAGGTGGCTGGACACTTCACTTATGGAGTGATGGCAGTCTCTTTTACCACATTTACTTTCTGGAGTCTGTTTGGCACACACATTTTACCCGCTTCTCTGTACCAAGGAAGTGCTGTTTCACTGGCTTTGCAGCTTGCTTGCAGTGTTCTGGTTATTGCTTGTCCATGTGCACTTGGGTTAGCCACACCTACTGCTGTGCTGGTTGGAACTTCTTTGGGAGCTACAAGAGGATTACTTTTGCGTGGTGGAAACATTTTAGAGAAGTTTGCCATGGTAAATACTGTTGTGTTTGACAAAACAGGGACCCTGACGATTGGTAGACCTGTTGTAACAATGGTTGTCTCTCCTACATGCAGACAAAATGCAACTTCAAGCCAAATTGAAGAAACTACTTGGTCTGATGTTGAAATCCTGAGGTTAGCAGCTGCAGTAGAATCAAATTCAGTACATCCAGTTGGAAAAGCGATTGTTGATGCTGCTCAGGAACTTAATTGTCATAATGGCAAGGTAGCAGATGGATCATTCCTGGAAGAACCTGGATCTGGTGCAGTTGCAACCATTGATAACAAACAGGTTTCTGTTGGGACATGGGAATGGATCACCAGGCATGGAATTAAAAGCAGTATCCAGGAAGAAGTAGAGGAGTGTAAAAACCAATCTGTTGTCTATGTTGGAGTTAATGATACTCTAGCTGGCCTAATTTATATTCAAGATGAGATAAGGGAAGATGCAAGGCATGTTATTGACACATTGTCTAAGCAAAATATTGATGTATACATGCTGTCTGGAGACAAAAGGAATGCAGCTGAGTATGTTGCATCTCGTGTTGGAATTCCTAAAGAAAGGGTGCTATCTGGAGTGAAACCGGATGAGAAAAAGAATTTCATAAATGAGCTACAGAAGGATCAGAACATTGTAGCCATGGTTGGTGACGGAATTAATGATGCAGCTGCCCTGGCTTCTTCACATATTGGCATTGCATTAGGTGGAGGTGTTGGGGCTGCTAGTGAGGTGTCTTCAATTGTATTGATGCGCAACCAGCTCTCACAGCTACTTGATGCTTTGGAGCTTAGCAGGCTAACCATGAATACTGTAAAACAAAATCTTTGGTGGGCTTTCATTTACAACATTGTAGGGATTCCAATTGCAGCTGGAGTGTTATTTCCTGTAAATGGGACCATGCTGACTCCATCAATTGCAGGTGCTCTCATGGGGTTGAGTTCCATTGGCGTAATGTCTAACTCATTGCTTTTAAGATTCAAATTTTCCTCAAAGCAAAAACAAATACATGCCACATTCCCAAATATCAAAATCAAGCCAGATTCTGATTTGCCACACCAAAACCAGAAAATAAAATATTCAAGTTAG 2865 0.4426 MPFTNPMNSTLTVTATAQMPFLKPFHRHFTAPPHNLLLLRRNNLEHVVASYNNSSHCISTSFVSVSSSRSLCAFSSLLRRTPCRLRCVSSSDASFASSTGGGNGGDGASGGSGGGGGGYGGESGDGSVKLVVDAAAQDISAISPDVIILDVSGMVCGGCAANVKRILESQPQVSSASVNLTTETAIVWPVSEAKTAPNWKKQLGEELAEHLTGCGFNSSLRDSVRDNFFQIFQRKMEEKRKQLRESGCELAVSWALCAVCLVGHLSHFFAAKAPWIHAFHSTGFHMSLSLFTLLGPGRQLILDGLKSLLKRAPNMNTLVALGALSSFTVSSFAAFLPKLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKATSDMTGLLSMLPSKARLLVNNGVTEVGSIVEVPSDSLSVGDQIIVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKLPGSEVAAGSININGTLTLEVRRPGGETAMGDIVRLVEEAQSRETPVQRLADKVAGHFTYGVMAVSFTTFTFWSLFGTHILPASLYQGSAVSLALQLACSVLVIACPCALGLATPTAVLVGTSLGATRGLLLRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTMVVSPTCRQNATSSQIEETTWSDVEILRLAAAVESNSVHPVGKAIVDAAQELNCHNGKVADGSFLEEPGSGAVATIDNKQVSVGTWEWITRHGIKSSIQEEVEECKNQSVVYVGVNDTLAGLIYIQDEIREDARHVIDTLSKQNIDVYMLSGDKRNAAEYVASRVGIPKERVLSGVKPDEKKNFINELQKDQNIVAMVGDGINDAAALASSHIGIALGGGVGAASEVSSIVLMRNQLSQLLDALELSRLTMNTVKQNLWWAFIYNIVGIPIAAGVLFPVNGTMLTPSIAGALMGLSSIGVMSNSLLLRFKFSSKQKQIHATFPNIKIKPDSDLPHQNQKIKYSS 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0815 954 ProSitePatterns Heavy-metal-associated domain. 151 180 IPR017969 GO:0046872
Lal18g0815 954 Gene3D - 606 739 IPR023299 GO:0000166
Lal18g0815 954 Pfam E1-E2 ATPase 379 573 - -
Lal18g0815 954 SUPERFAMILY HMA, heavy metal-associated domain 147 193 IPR036163 GO:0046872
Lal18g0815 954 SFLD p-type atpase 578 858 IPR044492 -
Lal18g0815 954 PANTHER ATP7, ISOFORM B 94 919 - -
Lal18g0815 954 ProSiteProfiles Heavy-metal-associated domain profile. 146 220 IPR006121 GO:0046872
Lal18g0815 954 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 352 628 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal18g0815 954 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 637 887 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal18g0815 954 CDD P-type_ATPase_Cu-like 250 919 - -
Lal18g0815 954 Gene3D - 146 223 - -
Lal18g0815 954 Pfam haloacid dehalogenase-like hydrolase 591 820 - -
Lal18g0815 954 SUPERFAMILY Calcium ATPase, transmembrane domain M 345 887 IPR023298 -
Lal18g0815 954 Gene3D - 586 858 IPR023214 -
Lal18g0815 954 CDD HMA 149 216 IPR006121 GO:0046872
Lal18g0815 954 MobiDBLite consensus disorder prediction 92 120 - -
Lal18g0815 954 Pfam Heavy-metal-associated domain 149 216 IPR006121 GO:0046872
Lal18g0815 954 SFLD C1.7: P-type atpase like 578 858 - -
Lal18g0815 954 ProSitePatterns E1-E2 ATPases phosphorylation site. 597 603 IPR018303 -
Lal18g0815 954 SUPERFAMILY Calcium ATPase, transduction domain A 396 484 IPR008250 -
Lal18g0815 954 PRINTS P-type cation-transporting ATPase superfamily signature 434 448 - -
Lal18g0815 954 PRINTS P-type cation-transporting ATPase superfamily signature 595 609 - -
Lal18g0815 954 PRINTS P-type cation-transporting ATPase superfamily signature 731 742 - -
Lal18g0815 954 PRINTS P-type cation-transporting ATPase superfamily signature 753 763 - -
Lal18g0815 954 PRINTS P-type cation-transporting ATPase superfamily signature 808 827 - -
Lal18g0815 954 PRINTS P-type cation-transporting ATPase superfamily signature 831 843 - -
Lal18g0815 954 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 315 917 IPR027256 GO:0006812|GO:0016021|GO:0019829
Lal18g0815 954 Gene3D - 365 488 - -
Lal18g0815 954 SUPERFAMILY HAD-like 593 914 IPR036412 -
Lal18g0815 954 TIGRFAM ATPase-IB1_Cu: copper-translocating P-type ATPase 297 918 - -
Lal18g0815 954 PRINTS Copper-transporting ATPase signature 300 319 - -
Lal18g0815 954 PRINTS Copper-transporting ATPase signature 348 367 - -
Lal18g0815 954 PRINTS Copper-transporting ATPase signature 368 386 - -
Lal18g0815 954 PRINTS Copper-transporting ATPase signature 578 593 - -
Lal18g0815 954 PRINTS Copper-transporting ATPase signature 785 802 - -
Lal18g0815 954 PRINTS Copper-transporting ATPase signature 881 895 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0815 Lal-Chr18 10477841 10512611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0815 306 938 Primary Pumps ATPases AT1G63440 39.137 1.68e-126 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0815 K17686 - gmx:100796210 1399.8