Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0754 ATGGATCGAGGGGATCAAATGGCGTTATCCGGTTCTGCATCTTACTATATGCAGAGAGGGATGCCTGGTTCTGGAACGCAACCTGAATTGCATAATTCACCTAGTATTCGCCCAATTTCGAATCCCAATTTACCATTTCAATCAACCATTGGGGGTGGTACTCTAGCATCTACATTGTCAATGGACTCTACAGGAATTCCATCTCAATCGGTCAATGTAGGTGCTCCTTCGGGGACTCCATCTAGGGACCCTGTCAAAAGGAAGAGAGGAAGGCCTAGGAAATATGGAACTGATGGAACTGTGTCATTGAGATTAACTCCTAGTTCAACACCGGCTAGTCATCCTGGAACCTTGACGCAAACACAAAGCCAAAAACGAGGTCGAGGCCGCCCGCTTGGGTCTGGGAAGAAACAGCAGCTGGCTTCTCTTGGTGAATTGATGTCTGGTTCCGCTGGAATGGGTTTCAGTCCTCATATCATCACCGTTGGAGTTGGAGAAGACATTGCGACAAAAATTATGGCATTTTCTCAGCAGGGGCCTAGAGCTATATGCGTTCTGTCAGCCACTGGTGCTGTGTCTACAGTGAAACTTCGTCAGCCTTCAACTTCAGGTGGCACTGTCACATATGAGGGGCATTTCGAGATATTGTGCCTATCAGGGTCATACTTGCTTACTGATGGTGATGGCTCCCGCAATCGAACTGGCGGACTAAGTGTTTCTCTTGCCAGTCCTGATGGTCGTGTCATTGGTGGAGGAATTGGCGGAGTGCTTATTGCTTCAAGTCAAGTTCAGGTGATAATTGGGAGCTTTATGTGGGCTGGATCAAAGGCAAAGAAAATTAAGAAGGATGCTTCAGAAGGTGCAGAAGTTCCCATGGATTCAGATCATCAGGCTGTTCATAATCCGGTTGCGGTAAATAGCATGTCCTCGAATCAAAATTTTACTCCAACCACATCTCCAAGCCCTTGGCCTGCATCGCGCCCATTGGATATGCGCAATTCGCATATCGACATCGATTTAATGCGCGGGTAA 1032 0.4748 MDRGDQMALSGSASYYMQRGMPGSGTQPELHNSPSIRPISNPNLPFQSTIGGGTLASTLSMDSTGIPSQSVNVGAPSGTPSRDPVKRKRGRPRKYGTDGTVSLRLTPSSTPASHPGTLTQTQSQKRGRGRPLGSGKKQQLASLGELMSGSAGMGFSPHIITVGVGEDIATKIMAFSQQGPRAICVLSATGAVSTVKLRQPSTSGGTVTYEGHFEILCLSGSYLLTDGDGSRNRTGGLSVSLASPDGRVIGGGIGGVLIASSQVQVIIGSFMWAGSKAKKIKKDASEGAEVPMDSDHQAVHNPVAVNSMSSNQNFTPTTSPSPWPASRPLDMRNSHIDIDLMRG 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0754 343 MobiDBLite consensus disorder prediction 306 336 - -
Lal18g0754 343 MobiDBLite consensus disorder prediction 306 320 - -
Lal18g0754 343 MobiDBLite consensus disorder prediction 11 77 - -
Lal18g0754 343 ProSiteProfiles PPC domain profile profile. 151 294 IPR005175 -
Lal18g0754 343 SUPERFAMILY AF0104/ALDC/Ptd012-like 155 274 - -
Lal18g0754 343 CDD DUF296 157 270 IPR005175 -
Lal18g0754 343 MobiDBLite consensus disorder prediction 101 128 - -
Lal18g0754 343 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 33 316 - -
Lal18g0754 343 MobiDBLite consensus disorder prediction 1 140 - -
Lal18g0754 343 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 33 316 IPR039605 GO:0003680
Lal18g0754 343 Pfam Plants and Prokaryotes Conserved (PCC) domain 157 270 IPR005175 -
Lal18g0754 343 Gene3D - 157 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0754 Lal-Chr18 9131013 9137656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0754 1 343 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 50.670 4.80e-86 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0754 - - gmx:100783475 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0754 18 9131013 9137656 Lal18g0754 18 9131013 9137656 ECH