Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0729 ATGTTCATTGACCAAAATCCATTGAAGGATATAGATACTGCTGAAGTAGAATCAAAGGAATCCAGATTAAGGCATGTAGTCCCTGTGAAGGTGGATTCGAAAAGAAAAAAGAAATCTTCCAAGAAAAGTCGTGATCTGGACACCGATGAATTAAACTTGGATGCAACTTTGAAATCTGAATTTTCACATAATCAGCACTCGAGGCAGCAATCTAAAGATAATATTGATCTGGATAAGGTAACTGAAGAGTTTTTTCATCTAAAAGATGCTTGTTCCATGATGCGTGAAAATGACAGAGAAGTTCTCATGCAGTCAAAACACAAGCATGCTATTTCTGAAAACATTGCAAGAGATGCTATTCATGAATTTGTGAATCAGATGATACTGAATGGCAAAGATCTTGCAGAAGCTAGAAAATTCCTTTGCTCTGATGAACTTAAGGAAGCACTTGAGCTTTTAAGTTCAGATAAGGATTTTTTCCTTTCACTTGGAGAAGATCCAAATTCACTTTTGTCGAAATATGTTCAAGACTTCGTGAATTCTCAGAGGAAAAATGAGAATGAGTATAGTTCAGTCGACGGTTCCAATTTCTCTGAACAAGAGCTTGGCAATCTAGAAAACACCAATGAGATTGTCAACCACAAGAAGCATAACTTTTTCAGAAGAAGGGTTAAGTCTCAATCAAAAATTTCAACAAATGAAAATGGTAATACTGACTTTTCAAATAGGATTGTTATTTTGAAGCCTGGGCCAATGGACTTGAAACATTCTGCAACTGAAAACAACATTGACTCACCAATACATTCTCATGATAAAGTCCACTACAATAGTCCTTCCGTTAGAGGCAGTTCACATTTTTCTCTTACAGAGTTAAAAAGGAAATTAAAGCATGCTATGGGAAGGGAGAAACATGGAAACTCTGAAGGGATCTCTAGAAAATACCCTGCTGAATCTCAAAACAAGAGGCCAAGTGGCAAAGCACTTGGTAAAGACAACCCCGGAATGCGATCTCCTAATAAAGATCATTTCTTCATTGAAAAAATTGCAAGACGTACAAATGGTGTTATGAAAGGAGATAAGTCTGGTACATTGAAGGATTCTGATTTGGTTATGGAACATGAAAATACTAGTTATCCCAAACCAAGGATTTCTAACTTATACATAGAGGCTAAGAAACATCTTTCTGAGATTGTAAGTAATGGAGATGAGGACATCAACTTGTCAAGTAGGAGGACTCCCAGCACCCTTGGTAGAATCCTATCTCTTCCCGAGTATAACTTTTCTCCCCTTGGTAGTCCTGTAAGGGATTCGGAGCACCATTTTGTGACTGCACAGACAAGATTTTCTGCCCAAGATAAAAACTGGGAGTCTAATGAGGATAACTTTTCTCCCAAACAAGCAACCTGTGTTGATCATTTAGATCACGAAGCAGACAATCCAGAGAAGCAGTCATGCATTTGTGGTGAAAGCTCTAATGATCAAGTACAAGAAACTAAATCACACTCAAACTTCTCAGATGACTATGGTCATGTTGATAAAGAGGAAAATAGCTGTCTTTATAAAGATGAGATAGTTATTGAAGATGATATTGAATCTGAAAAAGAGAGAGATATTTTGGCATCTTCCTCAGAACCTGTTGGCCTCGGTACAGGAAAGGACGACCAACATGATAATTTCTCTGAAATTCATGATAGTGCAAATTGTTCTCAATGTTTGAAGCAAGATGTAAAAGAAGAAAATCAATCATCATCTCCACTGTCATCGCCTTCTTTGTCCACCACTATGAAAGTTGAAGAGCTAGAAAGTGGTTCAGATATATCTGGCCGACCGAGTCCTGTATCTGTTCTTGATACATTCTTAGAGGACGATAACAGTCTTGGCTACTCCAGATATCAACCTGTTGAAATAAGAGTAAGGCCACTGCAATTTGAAGAACAAGATTCTTCACCAGTAAATCAATTCCATAGCGGAAAACATTGTCTTGAAGATAACGAATTGATATATGACTATATTAAAAAAGTCCTGCAAACCTCGGGATTGACTAAGGATCAATTGTTTATGAAATGCCTTTCGTCGGACAAGATACTAGACCCTTCCTTGTTTGATCAGGTACAACTCCTATCAAACCATCTTTGCCAGGATCAGAAACTTCTATATGATTGCACCAATGAAGTTCTCATGGAGGTTTGTTGGCATTACTTTGGGGTCTCGCCTTTCGCATCATTTTTAAATCCTAGCATAAGGCCAACTCCAAATATGCAAAAGGTTATTCTCAAGGTCTGGGAAGGAGTGTGCTGGCATTTCCTTCCCTCGCCTCCACCGCTTACTTTGGAAAAAATTGTTAGGAAAGACATGGAGAAAAATGGTGCATGGATGGACCTCCGGTTCGAAGGTGAAACAATTAATTTTGAAATGGGTGAAGCCATTCTTGCAGAACTAATGGAAGATGCAATATTGAGTTGTGTCAGTGAAAGTTCAGAAAGTAAATGTTGTGAACTTTCAACTGGAATTGATAGACAACAAGAGTAG 2529 0.38 MFIDQNPLKDIDTAEVESKESRLRHVVPVKVDSKRKKKSSKKSRDLDTDELNLDATLKSEFSHNQHSRQQSKDNIDLDKVTEEFFHLKDACSMMRENDREVLMQSKHKHAISENIARDAIHEFVNQMILNGKDLAEARKFLCSDELKEALELLSSDKDFFLSLGEDPNSLLSKYVQDFVNSQRKNENEYSSVDGSNFSEQELGNLENTNEIVNHKKHNFFRRRVKSQSKISTNENGNTDFSNRIVILKPGPMDLKHSATENNIDSPIHSHDKVHYNSPSVRGSSHFSLTELKRKLKHAMGREKHGNSEGISRKYPAESQNKRPSGKALGKDNPGMRSPNKDHFFIEKIARRTNGVMKGDKSGTLKDSDLVMEHENTSYPKPRISNLYIEAKKHLSEIVSNGDEDINLSSRRTPSTLGRILSLPEYNFSPLGSPVRDSEHHFVTAQTRFSAQDKNWESNEDNFSPKQATCVDHLDHEADNPEKQSCICGESSNDQVQETKSHSNFSDDYGHVDKEENSCLYKDEIVIEDDIESEKERDILASSSEPVGLGTGKDDQHDNFSEIHDSANCSQCLKQDVKEENQSSSPLSSPSLSTTMKVEELESGSDISGRPSPVSVLDTFLEDDNSLGYSRYQPVEIRVRPLQFEEQDSSPVNQFHSGKHCLEDNELIYDYIKKVLQTSGLTKDQLFMKCLSSDKILDPSLFDQVQLLSNHLCQDQKLLYDCTNEVLMEVCWHYFGVSPFASFLNPSIRPTPNMQKVILKVWEGVCWHFLPSPPPLTLEKIVRKDMEKNGAWMDLRFEGETINFEMGEAILAELMEDAILSCVSESSESKCCELSTGIDRQQE 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0729 842 MobiDBLite consensus disorder prediction 541 561 - -
Lal18g0729 842 Pfam Domain of unknown function (DUF4378) 669 816 IPR025486 -
Lal18g0729 842 PANTHER (, RELATED) 1 834 - -
Lal18g0729 842 Pfam Protein of unknown function (DUF3741) 125 169 IPR022212 -
Lal18g0729 842 MobiDBLite consensus disorder prediction 574 600 - -
Lal18g0729 842 MobiDBLite consensus disorder prediction 361 375 - -
Lal18g0729 842 MobiDBLite consensus disorder prediction 574 611 - -
Lal18g0729 842 MobiDBLite consensus disorder prediction 15 47 - -
Lal18g0729 842 MobiDBLite consensus disorder prediction 354 375 - -
Lal18g0729 842 MobiDBLite consensus disorder prediction 297 342 - -
Lal18g0729 842 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 834 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0729 Lal-Chr18 8399172 8404918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0729 65 804 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 31.341 7.44e-70 245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0729 18 8399172 8404918 Lal18g0729 18 8399172 8404918 ECH
Lal22g0840 22 6302088 6307917 Lal18g0729 18 8399172 8404918 LSH