Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0677 ATGGGTTGGTTTTCATGTTTTGATCCAAGGGATGATGAGAAGCTCAATTCTCATCCTCATCAGAAGCAACAAGAACAAACCCATCATCATGATCTTCGCAAACACCATTCTCCCATTCCTTCTCTTATTTCCAAACTTCCCTCTGGAGCAGACAAGTTACGAACGAGAAGTAATGGGGGTTCCAAAAAGGAACATCATGCTCCCAATGCTATTCATATACCTGGTGTCCAGATTGCTGCTCAGACTTTTACTTTCCGTGAACTTGCTGCCGCTACTAAAAACTTTAGGCCGGAGTCCTTTCTAGGGGAAGGTGGTTTTGGAAGTGTGTACAAAGGGAGGCTGGAAAGCACCAGTCAGACTGTTGCTGTTAAACAGTTAGACAGAAATGGTCTTCAGGGTAATCGCGAATTCCTTGTGGAGGTTCTCATGCTCAGCCTTTTACATCACCCTAATCTTGTGAATCTCATTGGGTACTGTGCGGATGGGGACCAACGCCTTCTTGTATATGAATTTATGCCGATGGGATCATTGGAAGATCACCTTCACGACCTTCCCCCGGATAAGGAACCACTAGATTGGAACACTAGGATGAAAATAGCTGCTGGCGCTGCAAAAGGATTAGAATACCTTCATGACAAGGCAAACCCTCCTGTTATTTATCGGGACTTCAAGTCATCTAATATATTACTTGATGAAGGATTTCACCCGAAGCTCTCTGATTTCGGTCTTGCGAAGCTTGGTCCTGTTGGTGACAAGTCCCATGTTTCTACCCGTGTCATGGGAACTTATGGTTACTGTGCTCCCGAGTATGCTATGACTGGACAACTGACTGTGAAGTCCGATGTATACAGTTTTGGTGTTGTCTTATTAGAGCTGATTACTGGTCGTAAAGCGATTGACTGCACCCAATCCCATGGAGAACAGAATCTTGTCACATGGGCACGTCCTCTATTTAACGACCGCCGGAAGTTTTCAAAGTTGGCTGATCCGAAGCTACAAGGACGGTTTCCCATGCGAGGTCTTTATCAGGCTCTTGCCGTGGCATCAATGTGTATCCAAGAATCGGCTGCCACGCGTCCTTTGATCGGAGATGTGGTGACAGCCCTCTCTTATCTGGCCAACCAGGCACATGACACTAAGGGATCCGGTGGCGATGATAAAAGGAATAAAGACGATAAAGGCGGACGAATATTGAAAGACGATGAAGCTGGAGGATCTGGGCGTAGATTGGACTTAGAAGGATCCGAGAAAAATGAGTCCCCACGAGAAACTGCAAGGATGACAGATAGAGAACGTGCTGTGGCTGAAGCCAAGTTGTGGGGAGAGAACTTGAGAGAGAAAAGACGACAAAATGCGCTCTTGGGCAGTTTTGATGGCTCTAATGCTTAG 1389 0.4629 MGWFSCFDPRDDEKLNSHPHQKQQEQTHHHDLRKHHSPIPSLISKLPSGADKLRTRSNGGSKKEHHAPNAIHIPGVQIAAQTFTFRELAAATKNFRPESFLGEGGFGSVYKGRLESTSQTVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPMGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVLLELITGRKAIDCTQSHGEQNLVTWARPLFNDRRKFSKLADPKLQGRFPMRGLYQALAVASMCIQESAATRPLIGDVVTALSYLANQAHDTKGSGGDDKRNKDDKGGRILKDDEAGGSGRRLDLEGSEKNESPRETARMTDRERAVAEAKLWGENLREKRRQNALLGSFDGSNA 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0677 462 PANTHER OS07G0668900 PROTEIN 1 455 - -
Lal18g0677 462 SUPERFAMILY Protein kinase-like (PK-like) 73 369 IPR011009 -
Lal18g0677 462 ProSiteProfiles Protein kinase domain profile. 95 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0677 462 CDD STKc_IRAK 101 369 - -
Lal18g0677 462 Gene3D Transferase(Phosphotransferase) domain 1 172 395 - -
Lal18g0677 462 MobiDBLite consensus disorder prediction 376 432 - -
Lal18g0677 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Lal18g0677 462 PANTHER SERINE/THREONINE-PROTEIN KINASE PBS1 1 455 - -
Lal18g0677 462 MobiDBLite consensus disorder prediction 10 38 - -
Lal18g0677 462 MobiDBLite consensus disorder prediction 380 432 - -
Lal18g0677 462 ProSitePatterns Protein kinases ATP-binding region signature. 101 124 IPR017441 GO:0005524
Lal18g0677 462 MobiDBLite consensus disorder prediction 10 71 - -
Lal18g0677 462 Gene3D Phosphorylase Kinase; domain 1 79 171 - -
Lal18g0677 462 Pfam Protein kinase domain 98 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0677 Lal-Chr18 5867171 5872698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0677 1 449 Glycoside Hydrolase AT3G07070 56.319 8.61e-167 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lal18g0677 Pkinase 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0677 K13430 - qsu:112033137 737.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0677 18 5867171 5872698 Lal18g0677 18 5867171 5872698 ECH
Lal18g0677 18 5867171 5872698 Lal22g1408 22 16928666 16932844 LSH