Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0625 ATGAATGATTCTTCAGTGAAGAATTTGGCTATCATAGAGAAGAAGGCACAGAAACCAGGTGGTTGTGTTGGCATTGTCTTTCAGCTCTTTGAATGGAAGAGGAAACTTGCCAAGAAAAAACTCTTCTCCAAGAAACTTCTACTTCCTGCTCCTGCAAAAAAGTTCAATGGAGATGAAAAAATGCCCAATTCTAAGCTCCACTTGATTGCTAATGAGAACAATGGAGGTTTCCCAAGTCCTAAAAAGGGCACGAGTCGTTCAGATGTAGACCAAAGGACTGAAATGCAAGTCCCGAGTCTTGTAGCTAGGTTGATGGGTCTAGAAGCTATTCCGGGTGCTCAGCGAGATAAGTCCAAGAAAGCTTTGATTTCTGATAATTGTGGTGAAGAGGAGAAAGAATCTTTGGGTAATCATTGTGCATTGGATAGACTAGGTGTGGATTTGGAAGTGGGAGTTGTGAAGCATGATTCAAGACCTCAGAAGCTTCAGAAAACCGGGACATCTGATAGAATGGCAGTGACAAGGTTTGGAGCAGAAGCCTTGCAAATTAAGAGTGTTTTGTCTCATGCAAGGAGGAATAATCAGCAAAACCATCATCACCCGAAGCTTGCTTCTCCACTGAAGAGTCCAAGAATTACTTCAGGAAAGAGTGCCTCTCGAAGCTCCCGGTTAATTGGAGCAGCTACTAAAATCTTGGAACCTGGACTTCAGAATAAGAGCAGATTTAAAGGTTCTCTAACATATTCTTCGTCCGTGTATCCTCCTAAGACTGGCACTGTGACCAATTTTATAGGACCAAGCTCTGCAGTAATGCAAAATCAATCATGTTATTATGCTGCCTCAGCCAAACCTTCGATTGGCCATACTTCCTGCCAAAATTGTGGTACTTTTGTTGATGTTGTTGAGTGCACACCAGAGGTTCAGAAACCGCCAGCTATTGTCCCGGACGTCATCGCCCCTGCCTCTATGGTATCAGCATGGAAGAATGGAAGGACATTCACTCCCTCTCATGAACATGAAAGAGATATCGTTCTTCTGAGAAGTAAGGAGAAGATTATATCTGTTTTTACTGAAGAGGGAAAAAACAATGCAAATCTGCAACAATCTTGTAATGGACCCGCTACCAGAAGAATGCCAATGCCTCGAGAAAATCCAGCCACATGGAATTCATCACACCAGCCATTTAGGACCTTAGAGGATGATGCATCTTCTTTTGCCTTGAAACAGAAAACTCGAACACAAGAACAGATGTCAAGCAGTGAAAGACTTTCATCTGGACTGACAATGACTAATATGCAAGTAAAAAGATTATCATCGTCAATCAGCACTGTTAGTGGCACTAAAGACTTCGTTGCTTTTAATAGAAACACAAGTGGTCATACAAGGATGAGGGCACATATGAAAGTGGATAGTTCCAAATTTGACACGCAGAAAAAACCTTGTAATAGAAAGCATAATTCTTTGTTTCATGCAAAGACATTAGAGAGAAAAAGAAGGACCCTAAATGTCACACAAGTTGAAGGTACAGCTTCTGTTGATTCAAATGGTATGAGACTGACAAAGCTTCATTCTGATGCATTTGGTGGAAAAAGGAAGGACTTTAACGCTTCCTCCACAACCAGTTCTAATGTCAAAAGTAAACAATGTGATCAGGGAAAAGCAATTAAGATTAATGATAACAAGATCAATGGAGTAGTTTCTTTTACATTTGATTCCCCCTTGAAGCAAGAGCTAGAAATACCTTCTGAGATTCAAGAGTCAAGCAGCAACAATGAGAGGAAAACATGTTTCCAAAGACCTTCAACCTTGAGAGTTGATGCTTTAGGTGCCTTTTTGGTACAAAAACTTAAGGAATTAACCTCTCAAAAAGACGAGAATCTGGCTACAGGTGCTCCACCTAAAAAATCTAGTGCGACAATTATTCAAGAACTGATATCTGCTCTAGGTTCAGAGCAACTGATCTGTCATGATGATCGTCATTTGTTCAACGAAAACAATGGCGTCCATTATGAAGTAAAACGAGATACATTGTCAGGAACCTCTTGCAACGGTAATCATCTTAGCCCTGGATCTGTTCTGGAAGCTTCCTTTTCTTCCAGTAGTCTGGATGAAAGCTCAGGGCATGGTTTTCACCCCGACTCCACGAATTACTCATATGATCAACTGGAACATTTAGAATATGATTGTGATATTTCAGATTCTGCAACAACCTTTAACAAAGGGAGGATATGTTGTGAGAAGCTGACTGGTCGTGTCGATCAAATTCCTAAGGCATTTCAAAGTTTATATTCTTTTGGGACAAGTTTGACAACAAGCAAGCTCACTCATATGAAAGATGTTATCTTGAATGCGGAATTGGTGCTTGGATTATCCAGCAACCATAGTGAGGACAATGTAGTGCCACAACTTGTAATTTCTCGGTTTCTCCTCAATGAACTAGACAATATGGCGGATGATGCTATGTGCACAAATTTTAATGTCTTTGTTTGTTGTGAGGATTCTAAACAGAGAAAAGAACTAAAGGGGTTTCTCTTTGATTGTGTTATAGAATATCTAGAATCAAACTGCTGCAGATATTTTAAATGTGGATTTGAGGCATGGACGAAACTACCGTTGTGCATGAAATCCGATATATTAGCTCAAGAGGTCATGAAGGAGATGAAGAAGTGGGCATGTATGGTTGGAATGGTAGCCGACGAAATAATAGAATGGGAGATGAGCCATTCTCTGGGGAAATGGACTGACTTTGATATGGAAGCATTTGAGGCTGGTGTTGATATGGGTGGGGACATAATTGAAATTTTGGTTGACGAAATTGTTGAAGATCTTCTAGGTTGCAATCTGAGCTCCATTTGCTTCTAA 2862 0.4046 MNDSSVKNLAIIEKKAQKPGGCVGIVFQLFEWKRKLAKKKLFSKKLLLPAPAKKFNGDEKMPNSKLHLIANENNGGFPSPKKGTSRSDVDQRTEMQVPSLVARLMGLEAIPGAQRDKSKKALISDNCGEEEKESLGNHCALDRLGVDLEVGVVKHDSRPQKLQKTGTSDRMAVTRFGAEALQIKSVLSHARRNNQQNHHHPKLASPLKSPRITSGKSASRSSRLIGAATKILEPGLQNKSRFKGSLTYSSSVYPPKTGTVTNFIGPSSAVMQNQSCYYAASAKPSIGHTSCQNCGTFVDVVECTPEVQKPPAIVPDVIAPASMVSAWKNGRTFTPSHEHERDIVLLRSKEKIISVFTEEGKNNANLQQSCNGPATRRMPMPRENPATWNSSHQPFRTLEDDASSFALKQKTRTQEQMSSSERLSSGLTMTNMQVKRLSSSISTVSGTKDFVAFNRNTSGHTRMRAHMKVDSSKFDTQKKPCNRKHNSLFHAKTLERKRRTLNVTQVEGTASVDSNGMRLTKLHSDAFGGKRKDFNASSTTSSNVKSKQCDQGKAIKINDNKINGVVSFTFDSPLKQELEIPSEIQESSSNNERKTCFQRPSTLRVDALGAFLVQKLKELTSQKDENLATGAPPKKSSATIIQELISALGSEQLICHDDRHLFNENNGVHYEVKRDTLSGTSCNGNHLSPGSVLEASFSSSSLDESSGHGFHPDSTNYSYDQLEHLEYDCDISDSATTFNKGRICCEKLTGRVDQIPKAFQSLYSFGTSLTTSKLTHMKDVILNAELVLGLSSNHSEDNVVPQLVISRFLLNELDNMADDAMCTNFNVFVCCEDSKQRKELKGFLFDCVIEYLESNCCRYFKCGFEAWTKLPLCMKSDILAQEVMKEMKKWACMVGMVADEIIEWEMSHSLGKWTDFDMEAFEAGVDMGGDIIEILVDEIVEDLLGCNLSSICF 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0625 953 MobiDBLite consensus disorder prediction 70 91 - -
Lal18g0625 953 MobiDBLite consensus disorder prediction 192 221 - -
Lal18g0625 953 MobiDBLite consensus disorder prediction 533 547 - -
Lal18g0625 953 Pfam DUF761-associated sequence motif 90 115 IPR032795 -
Lal18g0625 953 Pfam Domain of unknown function (DUF4378) 775 938 IPR025486 -
Lal18g0625 953 PANTHER DNAA INITIATOR-ASSOCIATING PROTEIN 9 945 - -
Lal18g0625 953 MobiDBLite consensus disorder prediction 528 547 - -
Lal18g0625 953 MobiDBLite consensus disorder prediction 364 394 - -
Lal18g0625 953 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 9 945 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0625 Lal-Chr18 5435116 5440939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0625 10 943 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 30.864 2.78e-77 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0625 - - lang:109357106 1275.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0625 18 5435116 5440939 Lal18g0625 18 5435116 5440939 ECH
Lal18g0625 18 5435116 5440939 Lal22g1377 22 16676466 16681281 LSH