Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal18g0605 | ATGGCATTGCAGAACATTGGTGCTGGGAATAGTGACGATGCCTTCTACAGGTATAAGATGCCTAGAATGATTACCAAAATTGAGGGTAGAGGTAATGGTATAAAAACAAATGTTGTCAATATGGTTGATATTGCGAAGGCATTGGCAAGGCCAGCATCTTACACAACCAAGTATTTTGGCTGTGAACTTGGAGCCCAGTCAAAATTTGATGCGAAAACTGGGACTTCCCATGTTAATGGAGCACATGAAACTGCAAAACTTGCCGGCCTTCTTGAGAACTTCATCAAGAAATACGTTCAATGTTATGGCTGTGGGAATCCTGAAACTGAGATCTTAATTACGAAGACTCAAATGCTCCAGTTGAAATGTGCTGCTTGTGGTTTCGTGTCCGATGTGGATATGAGAGACAAGCTGACTACCTTTATCATCAAGAACCCTCCTGAAGTTAAGAAAGGATCCAAAGACAAGAAGGCCATGAGGAGGGCTGAGAAGGAGAGACAGAAGGAAGGTGAAGCAGCTGATGAGGAACTGAAAAAGGTGAAGAAAGAGGCTAAAAAGAAAGTTCCTTCTTCAAAGACTGGAACTATAAAGTCTACCTCTTCAAAGAAGAAAGGAAGTGGATCTGATGAAGAACGTTCATCACCTCCTCACAGTCAAATTGAAGAGAAAGAGGTTTCTAATGATGACGATGAAGATGATGATGATGATGTCCAATGGCTAACTGATACATCACTTAACGCTGCTCGCCAACGTATCCAAGAACAGTTAAGTGCTGTGACAGTGGATATGGTCATGCTCTCTACCGAAGAGCCTGAGAAGAAGAAAAAACCAGCTAGTAAAGCAAGTGAAGGTTCTGAGAATGGTGGTGATGTGAAGGATAAACTGGCCCGGGAAGTGAAAGCAAGTTTGAAGAAAGGAGTTGGTGCGGAAGAGTTGCATTCCCACCTTGCAGCCCTTCCTGGATCTACTCAGGAAAAGATGAGTGTTTTGTTTGACTCCCTTTTCGAGGGAGTTGAGAAAGGTTTTGCAAAAGAAGCAATTAAGAAGAGGAGCTATCTTGCTGTTGCAGTTTCTGGGGAAGAGGGATTGCAGCTGTTATTGCTCCATGCTATTGAGGAATTTTCTTGCAAGCCTAATTCCAATGCATTGAAGGAGGTTGCTCTGCTTTTGAAAACTCTTTATGATGCTGATGTGTTGGAGGAAGAGCCCATAGTGCAGTGGTATTCAAAAGGACTGAAGGGTGATAAAAAGGGTTCTCAGCTTTGGAAGAATGTTAAACCTTTCATTGATTGGCTTCAGAGTGCTGAATCAGAATCAGAATCAGAGGAAGAGATTCCTGCAGGTTCTGCGGCTGAAGATCCCAAGGTGAAGGCTATTATCCATTTTGGAGCAATTGAGTTGCTTGGAGAGTATTTTTCGTCGTCTAGAAAAAAGAACAGGCCATTGCCAACTATACTTAGCTGCATGCATCGTGCGCCATACCAGGAACATACTGAGCTTTGTAGTTACTTTTGGCTGCGTACTATAATTGCAGAAAGAGATGTTTTAGTCATCATGGCTTTGCAGAACATTGGTGCTAGTAATAGTGATGATGCCTTCTATAGGTATAAGATGCCTAGAATGATAACAAAAATTGAGGGTAGAGGTAATGGCATTAAAACAAATATTGTCAATATGGTTGACATTTCAAAAGCCTTGGCCAGGCCAGCCGCTTACACAACCAAGTATTTCGGTTGTGAACTTGGAGCCCAATCAAAATTTGATGAGAAAACTGGGACATCGCATGTTAATGGGTCACATGAAACTGCAAAACTTGCAGGCCTTCTGGAGAACTTCATCAAGAAATATGTTCAGTGTTATGGCTGTGGGAATCCTGAAACTGAGATCCTCATTACCAAGAGTCAAATGATCCAGCTGAAATGCGCCGCTTGTGGCTTTGTGTCTGATGTGGATATGAGAGACAAGCTGACTACCTTTATCATCAAGAATCCTCCTGAAGCAAAGAAAGGATCCAAGGACAAGAAGTCCATGAGGAGAGCTGAGAAAGAGAGATTGAAGGAAGGGGAAGCAGCTGACGAGGAAGTGAAAAAGCTGAAGAAAGAAGTGAAGAAGAAAGTCTCTTCATCTTCAAAGAATGGAACTGTGAAATCTACCTCTTCAAAGAAGAAAGGAAGTGGCTCTGATGAAGACCGTGTGTCACCTACTCACAATCCAATTGATGAGAAAGAGGCAGCTAGTGATGAAGATGAAGATGACGATGATGATGTACAATGGCAAACAGATACATCGATAGATGCTGCTCGTCAACGTATCCAAGAACAGCTAAGTGCTGCGACAGCTGATATGGTCATGCTCTCCACAACTGAACCCGAGAAGAAGAAGAAATCAGCTAGTAAGGCAAGCGGTGGTTCTAATGGTAACTCAATGGACCACGGTAAACTGGTTGGGGAAGTGAAAGCATGTTTGAAGAAAGGCATTGGTGCAAAAGAATTGCAGTCCCATCTGGCATCACTTCCTGGATCTGCTCAAGAAAAGATGAGTGCTCTTTATGAAGCCATATTCAATGGCATGGAGAAAGGGTTTGCTAAAGAAGCAACCAAGAAGAGGAGCTACCTCGCCTCTGCAGTTGCAGAGAAGGGTTCACAGTCGTTGTTGCTGCATGCAATCGAGGAATTTTCTGTGAAGTCCAGTTTCAATGCATTGAAGGAGGTTGCACTGGTTTTGAAGGCACTCTATGATGGTGATGTGTTGGAGGAGGAGCACATAGTGCAATGGTATCAAGGAGGGCTGAAAGGTGATAACAAGGACTCTCAGATTTGGAAGAATGTTAAACCCTTCATTGATTGGCTTCAGACTGCGGAATCAGAATCAGAGGAAGAATGA | 2883 | 0.4301 | MALQNIGAGNSDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPASYTTKYFGCELGAQSKFDAKTGTSHVNGAHETAKLAGLLENFIKKYVQCYGCGNPETEILITKTQMLQLKCAACGFVSDVDMRDKLTTFIIKNPPEVKKGSKDKKAMRRAEKERQKEGEAADEELKKVKKEAKKKVPSSKTGTIKSTSSKKKGSGSDEERSSPPHSQIEEKEVSNDDDEDDDDDVQWLTDTSLNAARQRIQEQLSAVTVDMVMLSTEEPEKKKKPASKASEGSENGGDVKDKLAREVKASLKKGVGAEELHSHLAALPGSTQEKMSVLFDSLFEGVEKGFAKEAIKKRSYLAVAVSGEEGLQLLLLHAIEEFSCKPNSNALKEVALLLKTLYDADVLEEEPIVQWYSKGLKGDKKGSQLWKNVKPFIDWLQSAESESESEEEIPAGSAAEDPKVKAIIHFGAIELLGEYFSSSRKKNRPLPTILSCMHRAPYQEHTELCSYFWLRTIIAERDVLVIMALQNIGASNSDDAFYRYKMPRMITKIEGRGNGIKTNIVNMVDISKALARPAAYTTKYFGCELGAQSKFDEKTGTSHVNGSHETAKLAGLLENFIKKYVQCYGCGNPETEILITKSQMIQLKCAACGFVSDVDMRDKLTTFIIKNPPEAKKGSKDKKSMRRAEKERLKEGEAADEEVKKLKKEVKKKVSSSSKNGTVKSTSSKKKGSGSDEDRVSPTHNPIDEKEAASDEDEDDDDDVQWQTDTSIDAARQRIQEQLSAATADMVMLSTTEPEKKKKSASKASGGSNGNSMDHGKLVGEVKACLKKGIGAKELQSHLASLPGSAQEKMSALYEAIFNGMEKGFAKEATKKRSYLASAVAEKGSQSLLLHAIEEFSVKSSFNALKEVALVLKALYDGDVLEEEHIVQWYQGGLKGDNKDSQIWKNVKPFIDWLQTAESESEEE | 960 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal18g0605 | 960 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 5-1-RELATED | 1 | 442 | - | - | |
Lal18g0605 | 960 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 5-1-RELATED | 519 | 960 | - | - | |
Lal18g0605 | 960 | MobiDBLite | consensus disorder prediction | 787 | 812 | - | - | |
Lal18g0605 | 960 | CDD | W2_eIF5 | 810 | 958 | - | - | |
Lal18g0605 | 960 | SMART | eIF2Bneu4 | 15 | 129 | IPR002735 | GO:0003743|GO:0006413 | |
Lal18g0605 | 960 | SMART | eIF2Bneu4 | 533 | 647 | IPR002735 | GO:0003743|GO:0006413 | |
Lal18g0605 | 960 | MobiDBLite | consensus disorder prediction | 267 | 294 | - | - | |
Lal18g0605 | 960 | Coils | Coil | 159 | 179 | - | - | |
Lal18g0605 | 960 | CDD | W2_eIF5 | 285 | 435 | - | - | |
Lal18g0605 | 960 | MobiDBLite | consensus disorder prediction | 666 | 707 | - | - | |
Lal18g0605 | 960 | Pfam | Domain found in IF2B/IF5 | 11 | 127 | IPR002735 | GO:0003743|GO:0006413 | |
Lal18g0605 | 960 | Pfam | Domain found in IF2B/IF5 | 529 | 645 | IPR002735 | GO:0003743|GO:0006413 | |
Lal18g0605 | 960 | SMART | 542_3 | 350 | 438 | IPR003307 | GO:0005515 | |
Lal18g0605 | 960 | SMART | 542_3 | 869 | 956 | IPR003307 | GO:0005515 | |
Lal18g0605 | 960 | ProSiteProfiles | W2 domain profile. | 804 | 960 | IPR003307 | GO:0005515 | |
Lal18g0605 | 960 | SUPERFAMILY | Zinc-binding domain of translation initiation factor 2 beta | 98 | 133 | IPR016190 | GO:0003743|GO:0006413 | |
Lal18g0605 | 960 | MobiDBLite | consensus disorder prediction | 722 | 743 | - | - | |
Lal18g0605 | 960 | SUPERFAMILY | Translation initiation factor 2 beta, aIF2beta, N-terminal domain | 528 | 619 | IPR016189 | GO:0003743|GO:0006413 | |
Lal18g0605 | 960 | Gene3D | - | 3 | 104 | - | - | |
Lal18g0605 | 960 | Gene3D | - | 519 | 622 | - | - | |
Lal18g0605 | 960 | Gene3D | - | 290 | 449 | - | - | |
Lal18g0605 | 960 | Gene3D | - | 814 | 960 | - | - | |
Lal18g0605 | 960 | MobiDBLite | consensus disorder prediction | 664 | 756 | - | - | |
Lal18g0605 | 960 | SUPERFAMILY | Translation initiation factor 2 beta, aIF2beta, N-terminal domain | 10 | 101 | IPR016189 | GO:0003743|GO:0006413 | |
Lal18g0605 | 960 | Gene3D | - | 105 | 145 | - | - | |
Lal18g0605 | 960 | Gene3D | - | 623 | 663 | - | - | |
Lal18g0605 | 960 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR | 1 | 442 | IPR045196 | GO:0003743|GO:0006413 | |
Lal18g0605 | 960 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR | 519 | 960 | IPR045196 | GO:0003743|GO:0006413 | |
Lal18g0605 | 960 | MobiDBLite | consensus disorder prediction | 147 | 237 | - | - | |
Lal18g0605 | 960 | SUPERFAMILY | Zinc-binding domain of translation initiation factor 2 beta | 616 | 651 | IPR016190 | GO:0003743|GO:0006413 | |
Lal18g0605 | 960 | MobiDBLite | consensus disorder prediction | 203 | 224 | - | - | |
Lal18g0605 | 960 | Pfam | eIF4-gamma/eIF5/eIF2-epsilon | 882 | 960 | IPR003307 | GO:0005515 | |
Lal18g0605 | 960 | Pfam | eIF4-gamma/eIF5/eIF2-epsilon | 364 | 442 | IPR003307 | GO:0005515 | |
Lal18g0605 | 960 | ProSiteProfiles | W2 domain profile. | 278 | 442 | IPR003307 | GO:0005515 | |
Lal18g0605 | 960 | MobiDBLite | consensus disorder prediction | 148 | 190 | - | - | |
Lal18g0605 | 960 | SUPERFAMILY | ARM repeat | 819 | 954 | IPR016024 | - | |
Lal18g0605 | 960 | SUPERFAMILY | ARM repeat | 289 | 436 | IPR016024 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal18g0605 | Lal-Chr18 | 5206348 | 5211705 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal18g0605 | 519 | 953 | Eukaryotic Initiation Factors Gene Family | AT1G77840 | 62.247 | 5.56e-171 | 503 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal18g0605 | K03262 | - | gmx:100777906 | 652.899 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal18g0605 | 18 | 5206348 | 5211705 | Lal18g0605 | 18 | 5206348 | 5211705 | ECH | |
Lal18g0605 | 18 | 5206348 | 5211705 | Lal22g1363 | 22 | 16569981 | 16571783 | LSH |