Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0593 ATGAGACCAATAGAAGCCGCCGCAGTTTCCTATATCAAGACATTGTATGCATTCACAAATGAAACATTGGCCAAGTATTCATATGCAACATCCCTGCAAGCTACTCTCAGATATGGTATATTAATAAGTCTTGTTCAAGGGCTTGGTCTTGGATTTACGTATGGACTTGCAATATGTTCTTGTGCATTACAACTCTGGGTTGGAAGGTTCTTGGTTATTCATGGAAAAGCACATGGTGGTGAAATTATTACAGCTCTCTTTGCTGTAATTCTGAGTGGCTTGGGGTTGAATCAAGCAGCAACGAATTTCTACTCATTTGATCAAGGACGAATAGCTGCTTATAGACTATTTGAGATGATAAGCCGGTCATCCTCCTCTGTTAATCAAGATGGCACTGCCCCCGATTCTGTGCAAGGAAATATACAGTTTCGGAATGTTTATTTCAGTTATCCATCTCGTCCTGAAATCCCTATATTGAGTGAATTTTATCTCACTGTACCTGCTAAGAAAGCTGTGGCACTTGTTGGCAGAAATGGCTCTGGAAAAAGTAGTATTATTCCACTCATGGAGCGTTTCTATGATCCTACATTAGGTGAAGTTCTTTTAGATGGTGAAAATATCAAGAATTTGAAACTAGAATGGCTGAGGAGCCAAATAGGACTAGTCACCCAGGAGCCTGCTTTGCTCAGTTTGAGTATAAGAGACAACATTGCTTACGGGAGGGGTGCCACTATGGATCAAATTGAAGAGGCTGCTAAAATAGCTCATGCACATACATTTATCAGCTCATTGGAGAAAGGTTATGACACCCAGGTTGGCAGGGCTGGTCTAGCCTTGAACGAAGAGCAGAAGATAAAACTTTCTATTGCAAGAGCTGTGCTTCTAAATCCATCAATTCTTCTGCTTGATGAGGTTACTGGTGGACTTGATTTTGAGGCTGAAAGGGCTGTTCAGGAAGCTCTGGATCTGCTTATGTTGGGACGCTCAACTATAATAATTGCCCGAAGGCTTAGTTTCATAAGGAATGCGGATTACATAGCCGTTATGGAGGAAGGTCAGCTTGTTGAAATGGGTACTCATGATGAATTGTTGACCCTGGGTGGCTTATATGCAGAGCTTCTTCGATGTGAAGAGGCAGCAAAACTTCCCAAGAGGATGCCTGTTCGAAACTACAAGGATACTGCAGCATTCCGAATTGAGAAAGATTCTTCAGAAAGTCATAACGCCAAAGAACCATCTCCCCCTAAAATGCTGAAATCACCTTCTCTTCAAAGAAGGTCTAATGTATCTCGAGCTACAGATGATATCTTAAACTTGCAAGAATCACCAAAAGTCCGGAGCCCACCACCTGAGAAGAATCTGGAAAATGGTCAGGCTTTCGATGCATCGGATAAGGAGCCATCAATAACAAGGCAGGATAGTTTTGAAATGAGACTGCCAGATTTGCCCAAGATTGATGTTCAGTCTGTGCATCGACAAACATCAAACGATTCTGATCCAGAATCCCCAGTTTCGCCTCTTTTAACATCTGATCCTAAAAACGAGCGCTCCCATTCACAGACTTTCAGTAGACCACATAGTCCTTCTGATGATGTTTCAGTTGCAATGAGAGAAAGAAAGGACTTGCGGCATCGAAAACCACCATCAATTCGGAAGCTAGCTGAACTTAGTCTTGCTGAGTGGCTTTATGCTGTGTTAGGCAGCATTGGTGCTGCTATCTTTGGTTCCTTCAATCCTCTTCTTGCTTACGTTATTGGCCTTGTGGTGACAGCGTACTATAGAATTGATGAAGAACATCACTTACAACAGGAGGTAAACAAGTGGTGCTTGGTCATTGGTTGCATGGGCATTGTGACAGTTATTGCCAACTTTTTGCAGCATTTCTACTTTGGTATAATGGGAGAAAAAATGACAGAAAGAGTTAGGAGAATGATGTTCTCAGCCATGCTACGCAATGAAGTTGGATGGTTTGATGATGAGGAAAACAGTGCTGACAATTTATCCATGCGATTGGCCAACGATGCTACTTTTGTACGAGCTGCTTTTAGCAACCGACTTTCCATATTTATACAAGACAGTGCTGCAGTTATTGTTGGTCTTCTCATTGGTGCTTTGCTGCACTGGCGGTTAGCACTTGTGGCTTTTGGAACCCTTCCAGTTCTGTGTTTGTCTGCCTTTGCCCAGAAATTGTGGCTTGCTGGATTTTCAAGGGGCATACAGGAAATGCACAGAAAGGCATCTTTGGTTCTTGAAGATGCAGTTAGAAACATTTACACTGTTGTTGCATTTTGCGCTGGTAATAAGGTGATGGAGCTCTATAGGCTGCAGTTAAAGAAAATATTCAAGCAAAGCTTTCTTCATGGAATGGCAATTGGTTTTGCTTTTGGCTTTTCACAATTTCTTCTCTTTGCTTGTAATGCCCTTCTACTTTGGTACACTGCACTATGTATAAAAAATGGTTATATTGATCCACCTACTGCACTCAAGGAGTACATGGTTTTCTCATTTGCAACATTTGCACTTGTGGAGCCATTTGGATTGGCTCCTTACATACTTAAACGACGGAAATCTCTCATATCAGTGTTCGACATTATAGATCGTGTGCCTAAAATTGAGCCTGATGATAGCTCAGCATTGAAGTCACCCAATGTATATGGAAGCATTGAGTTAAAGAATGTTGATTTTTGTTACCCATCTCGTCCCGAAGTGTTGGTATTGAGCAATTTTAGTCTCAAAGTCAGTGGGGGACAGACAGTTGCTATTGTGGGAGTTTCAGGTTCGGGGAAGAGCACTATAATATCCTTGATTGAGAGATTTTACGATCCAGTTGCTGGTCAAGTTATACTTGATGGGAGGGACTTAAAGCTCTATAACTTGAGATGGTTGAGGAGTCACCTTGGTCTTATTCAGCAGGAACCTATTATCTTCTCAACAACCATAAGGGAAAACATAATATATGCAAGGCATAATGCCAATGAATCTGAGATGAAAGAGGCTGCAAGAATAGCAAATGCTCATCATTTTATTAGCAGCTTGCCTCATGGATATGACACTCATGTCGGGATGAGAGGTGTTGACTTAACCCCGGGACAGAAACAGAGAATTGCAATTGCGAGGGTAGTGCTGAAAAATGCTCCTATCTTGTTGGTAGATGAAGCAAGTTCGGCAATTGAATCTGAGTCAAGCCGAGTAGTGCAAGAGGCTCTAGAAACCCTAATGATGGGAAACAAGACCACTATTTTAATAGCGCATAGGGCTGCAATGATGAGGCATGTGGACAATATTGTGGTGCTTAATGGAGGACGGATTGTGGAGGAGGGGACTCATGATTCATTGGCAGCAAAGAATGGTCTTTACGTCCGATTGATGCAACCTCATTTTGGTAAGGCAATGCGTCAGCATCGGCTTGTTTAG 3414 0.4215 MRPIEAAAVSYIKTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVIHGKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSSVNQDGTAPDSVQGNIQFRNVYFSYPSRPEIPILSEFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRGATMDQIEEAAKIAHAHTFISSLEKGYDTQVGRAGLALNEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSFIRNADYIAVMEEGQLVEMGTHDELLTLGGLYAELLRCEEAAKLPKRMPVRNYKDTAAFRIEKDSSESHNAKEPSPPKMLKSPSLQRRSNVSRATDDILNLQESPKVRSPPPEKNLENGQAFDASDKEPSITRQDSFEMRLPDLPKIDVQSVHRQTSNDSDPESPVSPLLTSDPKNERSHSQTFSRPHSPSDDVSVAMRERKDLRHRKPPSIRKLAELSLAEWLYAVLGSIGAAIFGSFNPLLAYVIGLVVTAYYRIDEEHHLQQEVNKWCLVIGCMGIVTVIANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDDEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVGLLIGALLHWRLALVAFGTLPVLCLSAFAQKLWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFKQSFLHGMAIGFAFGFSQFLLFACNALLLWYTALCIKNGYIDPPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFDIIDRVPKIEPDDSSALKSPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVSGGQTVAIVGVSGSGKSTIISLIERFYDPVAGQVILDGRDLKLYNLRWLRSHLGLIQQEPIIFSTTIRENIIYARHNANESEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLVDEASSAIESESSRVVQEALETLMMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLAAKNGLYVRLMQPHFGKAMRQHRLV 1137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0593 1137 PANTHER ABC TRANSPORTER B FAMILY MEMBER 20-RELATED 6 1133 - -
Lal18g0593 1137 SUPERFAMILY ABC transporter transmembrane region 9 121 IPR036640 GO:0005524|GO:0016021
Lal18g0593 1137 SUPERFAMILY ABC transporter transmembrane region 547 873 IPR036640 GO:0005524|GO:0016021
Lal18g0593 1137 MobiDBLite consensus disorder prediction 420 437 - -
Lal18g0593 1137 Gene3D - 131 384 IPR027417 -
Lal18g0593 1137 MobiDBLite consensus disorder prediction 489 544 - -
Lal18g0593 1137 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 565 857 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal18g0593 1137 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 8 108 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal18g0593 1137 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 141 376 IPR003439 GO:0005524
Lal18g0593 1137 SMART AAA_5 168 548 IPR003593 -
Lal18g0593 1137 SMART AAA_5 915 1102 IPR003593 -
Lal18g0593 1137 Gene3D ABC transporter type 1, transmembrane domain 537 876 IPR036640 GO:0005524|GO:0016021
Lal18g0593 1137 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 878 1124 IPR027417 -
Lal18g0593 1137 Pfam ABC transporter 906 1054 IPR003439 GO:0005524
Lal18g0593 1137 Pfam ABC transporter 162 306 IPR003439 GO:0005524
Lal18g0593 1137 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 888 1125 IPR003439 GO:0005524
Lal18g0593 1137 MobiDBLite consensus disorder prediction 398 467 - -
Lal18g0593 1137 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 131 375 IPR027417 -
Lal18g0593 1137 MobiDBLite consensus disorder prediction 489 528 - -
Lal18g0593 1137 PANTHER ABC TRANSPORTER B FAMILY 6 1133 - -
Lal18g0593 1137 Pfam ABC transporter transmembrane region 10 91 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal18g0593 1137 Pfam ABC transporter transmembrane region 570 834 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal18g0593 1137 Gene3D - 879 1134 IPR027417 -
Lal18g0593 1137 CDD ABC_6TM_Pgp_ABCB1_D2_like 556 871 - -
Lal18g0593 1137 Gene3D ABC transporter type 1, transmembrane domain 6 122 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0593 Lal-Chr18 5050978 5060634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0593 9 434 Calmodulin-binding Proteins AT2G36910 46.065 3.49e-106 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0593 K05658 - gmx:100789116 2021.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0593 18 5050978 5060634 Lal22g1344 22 16361016 16377574 LSH