Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0581 ATGACTAGTTTTCAGTTTCATTGGAAAGTGTTAAGTTTGTTGATTTCAGTTTCCTATTGCTTTGGAAACAATGACATGCAAGTTCAGTTGGATGATGATGTTCTTGGTCTGGTTGTGTTCAAATCAGACATTCATGACCCTTCTTCTTATCTTGCTTCATGGAATGAAGATGATGTTAATCCTTGTTCATGGAAATTCATACAATGCAATCCTCATAGTGGAAGAGTTTCTGAGGTATCATTACATGGCTTAGGATTATCTGGTAAGATAGGAAGAGGTCTTGAAAAGTTGCAGCATCTAAAGGTATTGTCTCTTTCTCATAACAACTTTAGTGGGAGTATTAGTCCAGCACTTACTCTTCCTAGTAGTCTTCAAAGTCTGAACCTTAGTCATAATGGTTTTTCTGGTACCATACCTACTTCTTTTGTGAATATGAGTGCAATAAGGATTCTTGATCTCTCTGAGAATTCATTTTCAGGACCAATCCCTTACAACTTTTTTGACAGCTGCTTTTCCCTTCATTACCTTTCTTTAGCTAGGAATATGTTTGAAGGGTCAATTCCTAGCACACTTTCTAAATGTTCCATTTTGAATAGCCTTAATCTTTCCGATAACCGACTCGCTGGTTATGTTGAGTTTACTGTGATTTGGTCATTAAAAAGACTTAGGAATTTGGATCTATCCAACAATTCTTTGTCTGGGTACTTAACTAATGGAATTTCAGCCATATATATCCTGAAAGAGATCCTGTTACATGGTAACCAGTTTTCGGGTCCATTACCTTCTGATATTGGCCTCTGCCTGCATTTGAATAGGTTGGATTTTAGTGATAATAAGTTCAGTGGAGAACTACCAGAGTCACTTGGGAGGCTTAGTTCATTGAGCTATTTCAAGGCATCGAATAATCTTTTAACCAGTGAATTGCCGCGGTCGATTGGTAATATGACAAATCTGGAATACCTTGATCTATCAAACAATCAATTCACTGGAAGCATCCCTCAATCACTAGGGGGACTAATATCACTGACTTATCTAAGCATTTCAAATAACAAGCTTGTAGGAAATATTCCAATGTCATTGGTTTCTTGCACGAAGTTATCAGTGATTAGGCTCGACGGTAATGGTTTCAACGGCAGCATACCAGAGGGTTTGTTTGGCCTAGGATTGGAGGAAATAGACTTATCCAATAATGATCTGACAGGTTCAATTCCAGCAGGCTCAAACAGGCTCTTGGAAACTCTCACCAATTTAGATCTTTCAAAGAACAATCTCCAGGGAATTATCCCTGCCGAAATTGGTCTTCTTTCCAAACTAAGATATTTGAATTTGTCTTGGAATGATCTTCATTCACAGATGCCTCCGGAATTTGGTCTCCTTCAAAATCTAACAGTTTTAGATCTACGAAACAGCGCCTTATACGGTGTTATTCCAGATGGTATATGTGATTCAGGCAATTTGGCCATTCTTGAACTGGATGGAAATTCATTGAAGGGATCTATTCCTCAGGAGATTGGGAATTGTTCATCACTTTACTTACTGAGTTTGTCTCACAATAACTTGAGTGGTTCAATTCCAAGGTCAATGTCAAAGATAAACAAGCTCAAAATCCTCAGATTAGAATTCAATCAACTAAGTGGAGAGATACCGATGGAGTTTGGAATGCTACGAAATCTTCTTGCTGCGAATATATCGTATAACAGGCTCACTGGCAGGCTGCCAAGTGGTAGCATATTTGCGAACTTGGACAAAAGTTCATTGGAAGGAAACCTTGGTCTCTGCTCACCTTTGTTGAAGGGTCCATGTAAGATGAATGTGCAAAAGCCACTAGTGCTTAATCCAAATGCATTTAACAACCAAACAGGTTCTGATAGGCACAGAAGTGAATCATCCATGTCTAGCACAATTCATCACCACATGTTCCTTAGTGTTTCTTCTATTATAGCAATTTCAGCATCCTTTGTTATCATATTAGGAGTAGTTGCTATTTGTCTACTTAATGTTTCTGTGAGGAAAAGGCTATCATTTGTGGATAATGCTTTGGAAAGCATGTTCTCAAGCTCTTCTAGATCTTCAAGTCCACCCTCAGGAAAACTTATACTGTTTGATTCGCAGCATTCCTCGCTTGACGGGTTCAGCAATCCAGAATCCTTGCTCAACAAGGCATCTGAGATCGGTGAAGGGGTCTTTGGAATAGTGTACAAGATTCCATTGGGATCACATGGTAGAATGGTAGCTATGAAGAAGCTTATAACCTCAAACATAATCCAATATCCTGAAGACTTTGACAAGGAAGTTCGAATCCTAGGAAAAGCAAGGCATCCAAATCTAATAGCATTGAAAGGATACTACTGGACTCCTCAGCTTCAGATTTTAGTAACAGAATATGCACCGAACGGTAGCTTGCAATCCAAGCTACATGAAAGGCTTCCTTCGACTCCTCTACTTTCATGGCCTAATAGATTTAAGATTTTGCTTGGAACAGCGAAGGGGCTTGCACATTTGCACCATTCGTACCGTCCACCAATCATCCACTACAACATAAAGCCAAGCAACATTTTACTCGACGAAAATTACAACCCAAAGATCTCCGATTTTGGGTTGGCTCGACTTCTGACAAAGCTAGACAAGCATGTGATGAGCAATAGGTTTAAAAGTGCAATAGGATATGTTGCACCAGAATTAGCATGCCAAAGCATAAGGGTCAATGAGAAATGTGATGTGTATGGTTTTGGAGTGATGATCCTTGAGTTAGTGACAGGAAAAAGGCCAGTAGAGTATGGAGAAGATAATGTGTTGATACTAAATGACCATGTAAGGTTTCTTCTTGAGCAAGGAAGTGTATTAGAATGTGTGGATCCAACAATGAATGAGTATCCAGATGATGAAGTAATTCCAGTTCTGAAGCTTGCAATGGTTTGTATCTCTCAAATACCTTCTAGTAGGCCTTCTATGACAGAAGTGGTGCAAATACTTCAACTCATTCAAACTCCACTTCCTCATAGGATGGAAATGTTTTAA 3018 0.3907 MTSFQFHWKVLSLLISVSYCFGNNDMQVQLDDDVLGLVVFKSDIHDPSSYLASWNEDDVNPCSWKFIQCNPHSGRVSEVSLHGLGLSGKIGRGLEKLQHLKVLSLSHNNFSGSISPALTLPSSLQSLNLSHNGFSGTIPTSFVNMSAIRILDLSENSFSGPIPYNFFDSCFSLHYLSLARNMFEGSIPSTLSKCSILNSLNLSDNRLAGYVEFTVIWSLKRLRNLDLSNNSLSGYLTNGISAIYILKEILLHGNQFSGPLPSDIGLCLHLNRLDFSDNKFSGELPESLGRLSSLSYFKASNNLLTSELPRSIGNMTNLEYLDLSNNQFTGSIPQSLGGLISLTYLSISNNKLVGNIPMSLVSCTKLSVIRLDGNGFNGSIPEGLFGLGLEEIDLSNNDLTGSIPAGSNRLLETLTNLDLSKNNLQGIIPAEIGLLSKLRYLNLSWNDLHSQMPPEFGLLQNLTVLDLRNSALYGVIPDGICDSGNLAILELDGNSLKGSIPQEIGNCSSLYLLSLSHNNLSGSIPRSMSKINKLKILRLEFNQLSGEIPMEFGMLRNLLAANISYNRLTGRLPSGSIFANLDKSSLEGNLGLCSPLLKGPCKMNVQKPLVLNPNAFNNQTGSDRHRSESSMSSTIHHHMFLSVSSIIAISASFVIILGVVAICLLNVSVRKRLSFVDNALESMFSSSSRSSSPPSGKLILFDSQHSSLDGFSNPESLLNKASEIGEGVFGIVYKIPLGSHGRMVAMKKLITSNIIQYPEDFDKEVRILGKARHPNLIALKGYYWTPQLQILVTEYAPNGSLQSKLHERLPSTPLLSWPNRFKILLGTAKGLAHLHHSYRPPIIHYNIKPSNILLDENYNPKISDFGLARLLTKLDKHVMSNRFKSAIGYVAPELACQSIRVNEKCDVYGFGVMILELVTGKRPVEYGEDNVLILNDHVRFLLEQGSVLECVDPTMNEYPDDEVIPVLKLAMVCISQIPSSRPSMTEVVQILQLIQTPLPHRMEMF 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0581 1005 ProSiteProfiles Protein kinase domain profile. 718 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0581 1005 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Lal18g0581 1005 Pfam Leucine rich repeat 316 375 IPR001611 GO:0005515
Lal18g0581 1005 Pfam Leucine rich repeat 389 448 IPR001611 GO:0005515
Lal18g0581 1005 Pfam Leucine rich repeat 123 182 IPR001611 GO:0005515
Lal18g0581 1005 ProSitePatterns Protein kinases ATP-binding region signature. 724 747 IPR017441 GO:0005524
Lal18g0581 1005 ProSiteProfiles Leucine-rich repeat profile. 317 340 IPR001611 GO:0005515
Lal18g0581 1005 ProSiteProfiles Leucine-rich repeat profile. 99 121 IPR001611 GO:0005515
Lal18g0581 1005 SUPERFAMILY L domain-like 32 236 - -
Lal18g0581 1005 PRINTS Leucine-rich repeat signature 222 235 - -
Lal18g0581 1005 PRINTS Leucine-rich repeat signature 315 328 - -
Lal18g0581 1005 Gene3D Ribonuclease Inhibitor 244 316 IPR032675 -
Lal18g0581 1005 Gene3D Transferase(Phosphotransferase) domain 1 800 1001 - -
Lal18g0581 1005 SMART LRR_typ_2 435 458 IPR003591 -
Lal18g0581 1005 SMART LRR_typ_2 219 242 IPR003591 -
Lal18g0581 1005 SMART LRR_typ_2 459 483 IPR003591 -
Lal18g0581 1005 SMART LRR_typ_2 411 434 IPR003591 -
Lal18g0581 1005 SMART LRR_typ_2 97 121 IPR003591 -
Lal18g0581 1005 SMART LRR_typ_2 315 339 IPR003591 -
Lal18g0581 1005 Gene3D Ribonuclease Inhibitor 317 604 IPR032675 -
Lal18g0581 1005 CDD STKc_IRAK 724 994 - -
Lal18g0581 1005 Gene3D Phosphorylase Kinase; domain 1 718 799 - -
Lal18g0581 1005 SUPERFAMILY Protein kinase-like (PK-like) 718 995 IPR011009 -
Lal18g0581 1005 SUPERFAMILY L domain-like 219 588 - -
Lal18g0581 1005 Gene3D Ribonuclease Inhibitor 29 167 IPR032675 -
Lal18g0581 1005 PANTHER BNAA09G02190D PROTEIN 11 1003 - -
Lal18g0581 1005 Gene3D Ribonuclease Inhibitor 168 241 IPR032675 -
Lal18g0581 1005 Pfam Leucine Rich repeat 97 112 IPR001611 GO:0005515
Lal18g0581 1005 Pfam Protein kinase domain 720 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0581 1005 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 11 1003 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0581 Lal-Chr18 4940914 4944328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0581 1 1002 Receptor kinase-like Gene Family AT3G28040 61.029 0.0 1191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Lal18g0581 Pkinase 3.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0581 - - gmx:100795810 1575.45