Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0579 ATGACTCAGTCTGTGGAGGTTTTGAATCGTTATGGAACGGATCTGGTAGGAGAAGGTAGAAGCTCAGAATCGGAATGTATGGTTGGATTTGAGTGTTTTCTGAATGTAGTGAGAGCATTAGGAATGGGATCATGTATTGGAGGAGATGGTGGGTCCCCACCATTTCTTCCAGATACTAATAGTAGTAATAATTTGGATGGTGGGAAGAGAAGGAGATTGAAGGGTTCATCTTCATTTGATTTTAAAGAAGTGCCTGGGAGAATGTTCTATAATGGATCAAGTAAAGTTGCATCTTTGTATAGTAAGCAAGGGAAAAAAGGGATCAACCAAGATGCCATGCTTGTCTGGGAGAACTTTTGTTCAAAGGAGGGAACCATATTTTGTGGTGTTTTTGATGGCCATGGACCTTATGGCCATAGGGTTGCAAAGGCAGTTAGGGATTCTTTTCCTTTAAAGCTTATTGCTCAATTGGATCTGCATCATAAGAATCAAGATAGACTCAGTGATCACAGCAGCGTTGCTGGAAGTTGTAATTCTGAAATTGGGTTTAGACTGGTTGATGAGAAACCTAATTTGACTGATAATGAGCTTGATGGAACAGATACTATTTTAACATTGAGGGAATCTTTTTTGAAGGCTTCTAAGTTTATGGACAAAGAACTGAAACTGCATCCTGATATCAATTGCTTTTGCAGTGGAACTACAGCAGTTACCTTAGTCAAGCAGGGGCAGGACCTTGTTCTTGGAAATGTTGGGGACTCACGAGCTGTATTGGGTACACGAGATCATAATGATTCTCTCATTGCTGTTCAGTTGACAATTGACCTTAAGCCAAATCTTCCAAGGGAAGAAGAGAGGATCAAGCTTCGTAGAGGAAGGGTTTTTTCCCTTCGGAATGAACCTGATGTTTCTCGTGTTTGGCTACCTAATACTGATTTCCCTGGACTTGCTATGGCACGTGCTTTTGGAGATTTTTGCCTGAAGGACTTCGGATTGATTGCGGTTCCTGATGTCTCGCATCATCGCCTTACTGAGAAGGATGAATTTGTTGTATTAGCAACAGATGGGATTTGGGATGTTTTATCAAATGAAGAAGTTGTGGACATTGTGGCATCTGCCTCACAGTCTAATGCTGCTCGAGTACTTGTTGAGACGGCTGTAAAAGCATGGAAGACGAAATACCGTTTTTCTAAGATTGATGATTGTGCTGCAGTTTGCCTCTTCTTTGATTCAAATTCAGAGTTGAAGTCTTCATATACAACAGAGTTGAAGTCTTCATATCCAGAGGCATCAATTGAGCAATCTGAGCAGTCATCTCTTCTCGGCGAGAAGGGAATTGGAGGGGATGTGCAATAG 1356 0.4145 MTQSVEVLNRYGTDLVGEGRSSESECMVGFECFLNVVRALGMGSCIGGDGGSPPFLPDTNSSNNLDGGKRRRLKGSSSFDFKEVPGRMFYNGSSKVASLYSKQGKKGINQDAMLVWENFCSKEGTIFCGVFDGHGPYGHRVAKAVRDSFPLKLIAQLDLHHKNQDRLSDHSSVAGSCNSEIGFRLVDEKPNLTDNELDGTDTILTLRESFLKASKFMDKELKLHPDINCFCSGTTAVTLVKQGQDLVLGNVGDSRAVLGTRDHNDSLIAVQLTIDLKPNLPREEERIKLRRGRVFSLRNEPDVSRVWLPNTDFPGLAMARAFGDFCLKDFGLIAVPDVSHHRLTEKDEFVVLATDGIWDVLSNEEVVDIVASASQSNAARVLVETAVKAWKTKYRFSKIDDCAAVCLFFDSNSELKSSYTTELKSSYPEASIEQSEQSSLLGEKGIGGDVQ 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0579 451 CDD PP2Cc 96 409 IPR001932 -
Lal18g0579 451 PANTHER ALPHABET, ISOFORM E-RELATED 42 417 - -
Lal18g0579 451 ProSiteProfiles PPM-type phosphatase domain profile. 96 409 IPR001932 -
Lal18g0579 451 SMART PP2C_4 85 407 IPR001932 -
Lal18g0579 451 MobiDBLite consensus disorder prediction 428 451 - -
Lal18g0579 451 SUPERFAMILY PP2C-like 92 411 IPR036457 -
Lal18g0579 451 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 42 417 - -
Lal18g0579 451 Pfam Protein phosphatase 2C 196 388 IPR001932 -
Lal18g0579 451 Gene3D - 90 411 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0579 Lal-Chr18 4928766 4933296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0579 69 439 PP2C-type Phosphatase Gene Family AT1G79630 54.020 1.48e-146 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0579 - - gmx:100810538 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0579 18 4928766 4933296 Lal22g1328 22 16167894 16177443 LSH