Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0577 ATGATGGCAGAAGGAGAAGAAGATAGGAACATTGACAGAAGAGAAGAAGGAACACCAATACGATACCTACCACTCGATCATCTCTACTCCGCCACGTCACCATGCCGCCGCGTCACCGTCATGTCTAAGAAGGTTAAAGCTCAACAAACCCAAAACGACAACGTTCTCTTACTACTTACCAAAACGACACCGTCTTTACCACCTCCTCATATTCCTCTTCTCAAACCTAAACCACCACTTCTTTATGTTTACTCTCGCCAACGACGCAAGAGAGACTCCAAAACGAAGTCGTTTTATGATTCATTGAACGATCGAGTTAACTCCGATGAAACTAGGTTTAACAAGAAGAGGAGAATTGGGACTAGTGAATTGGAGAAATTGGGTGTGGATTTTAGTGCATTCAGTAGTGGGAATTTCGATGGTTCAAGATTTAGAGAATGTCGCAATTCTGAGAACAGAAAGTGTGGTGGTTCTTTGGAGAATTTTCCAAAGTTAGTTTCTGAATCTTGCTCTGTGAAGAAATGGGCAGGGTTGGGTTTTGATAATGTTGATCCAGAGTCATTCATTGGACTACGATGCAAGGTTTATTGGCCCATGGATGATAAATCATATTCTGGCTATGTCAAAGGTTATGATACGGAAACTAAGATTCATAATGTCAAGTATGATGATGGTGATGAGGAAAATTTGATACTTTCAAAAGAAAATGTAAAATTCCATGTTTCTCATGACGATGTAAAACGTTTAAATTTGAGTTATGCCAAAGTTCGTGACAGTAATGTCTCTGATTATGACATTGATGAGATGCTTGCACTGGCTGCAAGTTTGGATGATTGTCAAGATTTTGAGCCTGGGGATATTGTATGGGCCAAGCTAACAGGCTATGCAATGTGGCCAGCTGTTGTTCTGGATGAATCACTTGCTAGCAACTGCAAGGGTTTGAAAATGCTTTTAGGAGGAAAATCGGTTCCTGTCCAATTTTTTGGAACTCATGACTTTGCAAGGGTTAGAGTGCAGCATGTGAAATCATTTATCGGCGGTCTTCTTACTGACCTACACTCGAAGTGCAAGAAACTTAGTTTTATTGAAGGTATAGAAGAGGCAAAAAGGTATTTAGGTGAACAAAGGCTTCCTCGGGCGATGATAGAGTTGCAAAAAGCATGTATAGTTGATGACTGTAACAATGTAAGTGGCGAAGATGGGGGATATACAAATTCCGATGAAGATCGTTTAAATGACAAAGGAACTTGGATGGAAATGGAAAACACTTTAACTTTTCCTTATGAAGTAGGAGACATGCAAATTATAAGCCTTGGAAAAATAGTTGAAGATTCTGCATCTTTCAGGGATGGAAGATCCATCTGGCCAGAAGGCTACACAGCAGTGAGGAAGTTTACTTCATTTACTGACCCTAAAGTATCTGCCCCTTATAAGATGGAGGTGTTGAGAGATCCAGAATCCAAGGTCCGACCACTTTTTAGAGTGACAATTGATGGTGGTGAGCAGTTCAATGGTTGTACACCATCTGCTTGCTGGAATCAAATATACAAAAGGATAAAGAAAATGGAAAATGATGATTCTGAAGGTTCTGTTGCAGAAGGTGGGGTAGAACGGGGCTACAAATCTGGGTCTGACATGTTTGGTTTCTCCAATCCCAAAGTGTCTAAACTTATCCAGGGATTATCTAAATCCAAAGTCTCTTCCAAAAACTCAATTTCCAAGTCAGGTTCCAGAAGATATAATGACTTGCCTCTTGGTTATAGGCAGGTTCATATTAATTGGTTTGATCTTGATAAGTGCAATGTGTGCCACATGGATGAGGAGTACGAGAACAATCTATTTCTGCAGTGTGACAAATGCAGAATGATGGTCCATGCAAGATGTTATGGAGAACTTGAACCTGTTAATGGAGTGCTATGGTTATGCAAATTGTGTCGTTTTGGTGCTGCTTCTCCACCACCTTGCTGCTTATGTCCACTCATAGGAGGCGCAATGAAGCCTACAACAGATGGCCGGTGGGCTCATTTAGCTTGTGCCATGTGGATACCTGAAACTTGCTTGGCTGATGTTAAGAGAATGGAGCCTATTGATGGATTGAATAGAATCAGCAAGGACCGCTGGAAGTTGTTATGTAGCATATGTGGGGTCTCTTATGGTGCCTGCATCCAATGTTCAAACAATTCGTGTCGAGTAGCATATCACCCACTTTGTGCACGTGCTGCTGGTCTCTGTGTTGAGCTCGAGAATGAGGACAGGCTCTATCTACTATCTTTTGATGATGATGAAGATCAGTGCATACGCCTACTTTCTTTCTGCAAGAAACATAGGCAGCCATCTAATGAACCTTCTTTTGCCGATGAACGTATTGTTCGAGTTGTCGGTCCATGTTCAGACTATGAGCCACCACCTAACCCATCTGGTTGTGCTCGAACTGAGCCATATGATTACTTTGGAAGGAGAGGCCGAAAGGAACCTGAAGCACTTGCAGCTGCATCATTGAAACGTTCGTTTGTAGAGAATCAACCTTACTTGGTTGGTGGATATTGCCAACATGGGTCGTCAAACAAACTAGAGACTTCTGGCAGAGGAGTCTGCACTAAATTCTTTTGTAGCCAGGAAAGGCTGAGAACCTCTCTGATTGATACTTCGAACAACATACTTTCTACTTCCGAGAAATATAAGTACATGAGGGAAACCTTTCGGAAACGGCTAGCATTTGGGAAGTCAAGAATACATGGATTTGGCATCTTTGCAAAGCACCCATATAAAGGTGGAGATATGGTGATTGAGTACACTGGTGAACTTGTTAGACCTACCATAGCTGATCGGAGAGAACACTTCATATACAATTCATTAGTGGGTGCTGGAACATATATGTTTCGGATTGATGATGAAAGAGTCATTGATGCTACTAGAGCAGGAAGCATTGCTCATTTAATTAATCATTCTTGTGCACCAAATTGCTATTCAAGAGTTATCAGTGTTAATGGCGATGAACATATTATAATATTTGCAAAGAGGGACATTAAACAATGGGAAGAGCTCACATATGATTACAGATTTTTCTCAATTGATGAACGACTTCCTTGTTACTGTGGCTTCCCAAAATGCCGAGGTATAGTAAATGATACCGACGCAGAAGAGCGAGCTGCTAAGCTATATGCACCTCGAAGCGATTTAACAGATTGGAGAGGAGAATGA 3201 0.4136 MMAEGEEDRNIDRREEGTPIRYLPLDHLYSATSPCRRVTVMSKKVKAQQTQNDNVLLLLTKTTPSLPPPHIPLLKPKPPLLYVYSRQRRKRDSKTKSFYDSLNDRVNSDETRFNKKRRIGTSELEKLGVDFSAFSSGNFDGSRFRECRNSENRKCGGSLENFPKLVSESCSVKKWAGLGFDNVDPESFIGLRCKVYWPMDDKSYSGYVKGYDTETKIHNVKYDDGDEENLILSKENVKFHVSHDDVKRLNLSYAKVRDSNVSDYDIDEMLALAASLDDCQDFEPGDIVWAKLTGYAMWPAVVLDESLASNCKGLKMLLGGKSVPVQFFGTHDFARVRVQHVKSFIGGLLTDLHSKCKKLSFIEGIEEAKRYLGEQRLPRAMIELQKACIVDDCNNVSGEDGGYTNSDEDRLNDKGTWMEMENTLTFPYEVGDMQIISLGKIVEDSASFRDGRSIWPEGYTAVRKFTSFTDPKVSAPYKMEVLRDPESKVRPLFRVTIDGGEQFNGCTPSACWNQIYKRIKKMENDDSEGSVAEGGVERGYKSGSDMFGFSNPKVSKLIQGLSKSKVSSKNSISKSGSRRYNDLPLGYRQVHINWFDLDKCNVCHMDEEYENNLFLQCDKCRMMVHARCYGELEPVNGVLWLCKLCRFGAASPPPCCLCPLIGGAMKPTTDGRWAHLACAMWIPETCLADVKRMEPIDGLNRISKDRWKLLCSICGVSYGACIQCSNNSCRVAYHPLCARAAGLCVELENEDRLYLLSFDDDEDQCIRLLSFCKKHRQPSNEPSFADERIVRVVGPCSDYEPPPNPSGCARTEPYDYFGRRGRKEPEALAAASLKRSFVENQPYLVGGYCQHGSSNKLETSGRGVCTKFFCSQERLRTSLIDTSNNILSTSEKYKYMRETFRKRLAFGKSRIHGFGIFAKHPYKGGDMVIEYTGELVRPTIADRREHFIYNSLVGAGTYMFRIDDERVIDATRAGSIAHLINHSCAPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSIDERLPCYCGFPKCRGIVNDTDAEERAAKLYAPRSDLTDWRGE 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0577 1066 SMART set_7 902 1026 IPR001214 GO:0005515
Lal18g0577 1066 Gene3D - 426 566 - -
Lal18g0577 1066 ProSiteProfiles SET domain profile. 902 1020 IPR001214 GO:0005515
Lal18g0577 1066 CDD SET_SETD1-like 890 1038 - -
Lal18g0577 1066 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 591 649 IPR013083 -
Lal18g0577 1066 Pfam PHD-finger 612 646 - -
Lal18g0577 1066 SMART fyrc_3 492 586 IPR003889 GO:0005634
Lal18g0577 1066 Gene3D SET domain 846 1056 IPR046341 -
Lal18g0577 1066 SMART PostSET_3 1026 1042 IPR003616 -
Lal18g0577 1066 ProSiteProfiles Extended PHD (ePHD) domain profile. 652 776 IPR034732 -
Lal18g0577 1066 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATX2 5 1063 - -
Lal18g0577 1066 SMART PHD_3 710 776 IPR001965 -
Lal18g0577 1066 SMART PHD_3 599 646 IPR001965 -
Lal18g0577 1066 ProSiteProfiles Post-SET domain profile. 1026 1042 IPR003616 -
Lal18g0577 1066 Gene3D - 183 235 - -
Lal18g0577 1066 SUPERFAMILY Tudor/PWWP/MBT 278 382 - -
Lal18g0577 1066 Pfam PWWP domain 285 372 IPR000313 -
Lal18g0577 1066 Gene3D - 272 379 - -
Lal18g0577 1066 Pfam F/Y rich C-terminus 490 565 IPR003889 GO:0005634
Lal18g0577 1066 ProSiteProfiles FYR domain FYRC motif profile. 488 575 IPR003889 GO:0005634
Lal18g0577 1066 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 650 778 IPR013083 -
Lal18g0577 1066 Pfam F/Y-rich N-terminus 431 481 IPR003888 GO:0005634
Lal18g0577 1066 ProSiteProfiles FYR domain FYRN motif profile. 425 484 IPR003888 GO:0005634
Lal18g0577 1066 ProSiteProfiles PWWP domain profile. 284 347 IPR000313 -
Lal18g0577 1066 CDD PHD_ATX1_2_like 599 645 IPR042010 -
Lal18g0577 1066 SUPERFAMILY Tudor/PWWP/MBT 187 230 - -
Lal18g0577 1066 ProSitePatterns Zinc finger PHD-type signature. 600 645 IPR019786 -
Lal18g0577 1066 ProSiteProfiles Zinc finger PHD-type profile. 597 648 IPR019787 -
Lal18g0577 1066 SUPERFAMILY SET domain 899 1039 IPR046341 -
Lal18g0577 1066 CDD ePHD_ATX1_2_like 655 775 IPR041956 -
Lal18g0577 1066 SMART PWWP_4 282 345 IPR000313 -
Lal18g0577 1066 SUPERFAMILY FYVE/PHD zinc finger 591 663 IPR011011 -
Lal18g0577 1066 Pfam PHD-zinc-finger like domain 654 775 - -
Lal18g0577 1066 Pfam SET domain 913 1019 IPR001214 GO:0005515
Lal18g0577 1066 PANTHER PHD FINGER PROTEINS 5 1063 - -
Lal18g0577 1066 SMART fyrn_3 440 484 IPR003888 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0577 Lal-Chr18 4887704 4901129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0577 600 746 C2H2 Transcription Factor Family AT3G14740 39.735 9.97e-27 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lal18g0577 zf-HC5HC2H_2 3.8e-33 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0577 - - lang:109356942 1868.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0577 18 4887704 4901129 Lal22g1326 22 16136478 16150114 LSH