Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0576 ATGAACCAAGTTGCCGTTGAAGGTTATTATTATAATTGTTTGGGATCTGATTTTATGGTTAGGCACATGGCTGAAGAGGATGAATCAAGGGCACAAACTATTACTACTCATAATGAAGCTGAACCTGATCCTGAATCTGGTTATATCTCAAAGGATGAAGAAAAAGCAAACAATAACAATAGTAGTAATTGGCTTGAATTAAGCATAGGTAGTTGTCACCAGAGTCATTCAACTACAATGACAACTACCAAGCACCACCAAATATCCAAAGGTGATCATCATCAAATGGCTCCAATTACCGATTCAGGTCTAATAGAGTTAGACCTGTTATCCGGTAACAGGAGCCATAATTTTAATTGGTCATCTCCAAGGACTAGCTTGGAGGCACCAACTATGTTTTCAGAGAGAAGTTGCCAAGGAGGGTCTAATTTTGGTAATGCTTCTTTACTTTTTGAACAAACTTCAATGTCCATGGGCATGCAAAGTGGTCCATTTAGTGCTCAAGCCTTTGGTAACATTCACCAACAACAACAAAATCAATCTCAAGAAATGATGAATTGGCAATTTGGTCCACTACCTCATTCTATGCCAATTATGCCATCTTCTTCTTTTGTTACTACATCTTCTTCTTATTCATTACAGTCTAGTTCTTCTTTGAGGCCTTTTTCTCCTCCACCCTCTCTTCCTTTAGGATCTTACTTTGCAACACCCTCTCCTCATTTCCCTTCTTCATCCTCTTCTGGGTTTCATCAATTTGATCTTGTGACTGGACCAACCTCAGATGTCACTACTGTTAGAGTTGTTGATCCTCCAAGAAGACCTCATTCTGGAATATGGTTTATGCTACAAGCTTCTCAAAATCAAGGGAAAGAACCACCCTTGCCCCAAATACCTAAGACCTACCTGAGAATCAAAGATGGAAAGATGACAGTTCGGTTGCTATTGAAGTATCTGGTTAGCAAACTCAGATTGGAGAACGAATCAGAGATAGAGATAACATGCAGAGGGCAAAAACTTCTACCTTTCTTGACGTTGCAGCATGTGAGGGATAACATTTGGAGTCCAAGGCATGACACTAGGACTTTGCTTTCAGATTCATCATCAACTTCAGATCATGTCATGCTACTCCATTACTGTAGAATCACTTCTTAA 1152 0.395 MNQVAVEGYYYNCLGSDFMVRHMAEEDESRAQTITTHNEAEPDPESGYISKDEEKANNNNSSNWLELSIGSCHQSHSTTMTTTKHHQISKGDHHQMAPITDSGLIELDLLSGNRSHNFNWSSPRTSLEAPTMFSERSCQGGSNFGNASLLFEQTSMSMGMQSGPFSAQAFGNIHQQQQNQSQEMMNWQFGPLPHSMPIMPSSSFVTTSSSYSLQSSSSLRPFSPPPSLPLGSYFATPSPHFPSSSSSGFHQFDLVTGPTSDVTTVRVVDPPRRPHSGIWFMLQASQNQGKEPPLPQIPKTYLRIKDGKMTVRLLLKYLVSKLRLENESEIEITCRGQKLLPFLTLQHVRDNIWSPRHDTRTLLSDSSSTSDHVMLLHYCRITS 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0576 383 Gene3D - 271 363 - -
Lal18g0576 383 PANTHER RING FINGER PROTEIN 10 378 - -
Lal18g0576 383 PANTHER RING FINGER PROTEIN 10 378 IPR044171 GO:0007275
Lal18g0576 383 MobiDBLite consensus disorder prediction 26 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0576 Lal-Chr18 4864752 4873798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0576 294 378 C3H Transcription Factor Family AT3G23060 35.955 9.81e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0576 - - lang:109325615 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0576 18 4864752 4873798 Lal18g0576 18 4864752 4873798 ECH
Lal18g0576 18 4864752 4873798 Lal6g1649 6 19258540 19269444 LSH