Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0571 ATGTTTAAGAAAAGGCACACCCTTTCTTCTCTTTTAAGGGAATTGTTTCTTTTGTTATTGTTCAGCTTGCACCATAGCACAGTGCAATGCCAAGGAAGGTTGAGTAAGCATGTTTCTTCAGCCTCATATTCACCTTCTAGGCCATCATCACCATCACATTACAAGGATGACCTTAGGAGAATCATTATTAGCATAGTTTTAGGAGCAGTAACTGGACTAGTTGGTTCTGTTTTCTTTGCCTGTGTGGTTCGTTGTGTTGTTCGATATCTTAACCGGACACCGATCCTCAAGGGTCCTGTTATATTTTCCCCAAAAATTGCACCCAAGACGCTTCAATCGGCGTTGGCAAAAGAAAACCATTTGCTTGGTTCAAGTCCGAATGGGAAATACTACAAAACCGTGCTTGACAATGGCCTTACAATTGCAGTCAAAAGACTAACACCTTTCGAGAGCAATTCACCAGAGATGAGGAGGAAATCGGTGAAGTGGCAGATACAGAAGCAGCTAGAGCTTCTTGCCAATCTAAGGCATAGGAACTTGATGAGCTTGAGGGCTTATGTCCGCGAAGCCGATAGGTTCTCGTTGGTTTACGATTATGTATCCACCGGGAGTCTTGCAGATTTGATGAATAGAGTAAGGGAAAATGAGTTGCAGCTTGGTTGGGAAGTTAGACTAAGGATTGCTGTTGGTATTGTGAAGGGTCTTCAGTATCTTCATTTCACATGTGTGCCTCAGATTCTGCATTGCAACTTAAAGCCCACAAATGTGATGTTAGATGCAGAGTTTGAACCAAGATTGGCAGATTATGGATTGAGCAAACTTCTACCAAACTTGGATAGAGGAACACATGGCAACAACCCTTTTCAGTCTTTTCATAATTGCAGGTACACAGACAAAAGTGACATTTTCAGTTTTGGCATGATACTTGGAGCTTTGTTAACTGGTAAGGATCCAACAGATGCATTCTTCGGAGAAGCGGCGAGTGGAGGAAGTTTGGGAAGTTGGCTGCAACAGTTGCAGCGAGCCGGTGAGGCACGAGAAGCTCTAGATAAGAGTATTCTTGGGGAAGAAGGGGAGGAAGATGAGATGCTAATGGCTGTTAGGATTGCTGCTGCATGCTTATCTGACATCTCTGCAGAGAGGCCTTCAAGTGATGAACTTGTTCACATGCTAACACAATTGCACAGCTTTTGA 1194 0.4338 MFKKRHTLSSLLRELFLLLLFSLHHSTVQCQGRLSKHVSSASYSPSRPSSPSHYKDDLRRIIISIVLGAVTGLVGSVFFACVVRCVVRYLNRTPILKGPVIFSPKIAPKTLQSALAKENHLLGSSPNGKYYKTVLDNGLTIAVKRLTPFESNSPEMRRKSVKWQIQKQLELLANLRHRNLMSLRAYVREADRFSLVYDYVSTGSLADLMNRVRENELQLGWEVRLRIAVGIVKGLQYLHFTCVPQILHCNLKPTNVMLDAEFEPRLADYGLSKLLPNLDRGTHGNNPFQSFHNCRYTDKSDIFSFGMILGALLTGKDPTDAFFGEAASGGSLGSWLQQLQRAGEAREALDKSILGEEGEEDEMLMAVRIAAACLSDISAERPSSDELVHMLTQLHSF 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0571 397 ProSiteProfiles Protein kinase domain profile. 116 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0571 397 Pfam Protein kinase domain 118 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0571 397 SUPERFAMILY Protein kinase-like (PK-like) 119 391 IPR011009 -
Lal18g0571 397 PANTHER - 11 397 - -
Lal18g0571 397 Gene3D Transferase(Phosphotransferase) domain 1 200 396 - -
Lal18g0571 397 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE CORYNE 11 397 - -
Lal18g0571 397 Gene3D Phosphorylase Kinase; domain 1 103 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0571 Lal-Chr18 4796060 4798721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0571 62 394 Receptor kinase-like Gene Family AT2G31880 32.486 2.94e-57 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Lal18g0571 Pkinase 5.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0571 - - gmx:102664172 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0571 18 4796060 4798721 Lal18g0571 18 4796060 4798721 ECH
Lal18g0571 18 4796060 4798721 Lal22g1325 22 16130891 16133500 LSH