Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0570 ATGGTTGTTGACCAGAAAGTTGAAAACACCAACGGTATAGACGGCGCCGTCAATGGTGCGCCGCCATGTTCCGCCGTGGACGGCGGATATGACGGGAGACCATGGAGGAGATTGCCACGTTGGACAAGAAAAGAGATCCTTGTTCTGATACAAGGAAAGACTGACGCTGAAAACCTGTTCAGGCCCGGTCCAGCGTTCGGTTCAGTTGAACCGAAATGGGTTTCAGTTTCAAGATACTGTAAGGATCATGGGATGAACCGGGGAGCGGTTCAGTGCAGAAAACGGTGGAGTAACATGGTAGGGGATTGTAAGAAGATTAAGGAGTGGGAAAATCAGATAAGGGATGAAACGGAATCGTTTTGGGTTATGAGGAATGATTTGAGAAGGGAGAGAAAGTTACCTGGGTATTTTGATAGGGAGGTTTATGATATTCTTGATGCTGTGTCGCCGGCGGCTGCTGCGGCGGCGGCGGCGGCGGTGGGTGATGTGGAGGTGCACATTTATGATAGTAACCGGAAGATGGAAAGTGAAGATGGATTGTTCTCAGATAATAATGAGAGAGATGAGGTTTTACCTCAACATCATGTCAAGGATGTTCCTATCTCAGATCGTAATGCTCTTGCACAGAGTAATATTATAGTTACAATTGCAATTGTTCTTCATATAATAAAAAAGGGTGAGCCTAGTATACTAGACACCCACCTAGTGGGAGAGTACGATGTAAACAACCTTACAGTTGCATCAAGACGACGAAAGAGGAAGCGATTTGCAACTGATGGAGAAGAAGAAACATTACAAAGTGAATTGATTGATGTATTGGAAAGGAATGGAAAAATGGTGGAAGATAAACTTGAATCTGGGAATTTGGAGTTGGATATGCAGCAGCAAAAGGACAATGCAAGTAACATAGTTGATGTACTTGATAAGCTTGCAAATGCTCTAGGTAGAATTGCTGACAAATTGTAA 966 0.441 MVVDQKVENTNGIDGAVNGAPPCSAVDGGYDGRPWRRLPRWTRKEILVLIQGKTDAENLFRPGPAFGSVEPKWVSVSRYCKDHGMNRGAVQCRKRWSNMVGDCKKIKEWENQIRDETESFWVMRNDLRRERKLPGYFDREVYDILDAVSPAAAAAAAAAVGDVEVHIYDSNRKMESEDGLFSDNNERDEVLPQHHVKDVPISDRNALAQSNIIVTIAIVLHIIKKGEPSILDTHLVGEYDVNNLTVASRRRKRKRFATDGEEETLQSELIDVLERNGKMVEDKLESGNLELDMQQQKDNASNIVDVLDKLANALGRIADKL 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0570 321 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 7 321 - -
Lal18g0570 321 ProSiteProfiles Myb-like domain profile. 33 100 IPR001005 -
Lal18g0570 321 Gene3D - 41 105 - -
Lal18g0570 321 Pfam Myb/SANT-like DNA-binding domain 40 123 IPR044822 -
Lal18g0570 321 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 7 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0570 Lal-Chr18 4782810 4786660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0570 27 108 Trihelix Transcription Factor Family AT1G76880 32.927 9.80e-06 45.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lal18g0570 Myb_DNA-bind_4 1.5e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0570 - - gmx:100788594 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0570 18 4782810 4786660 Lal18g0570 18 4782810 4786660 ECH
Lal18g0570 18 4782810 4786660 Lal6g1645 6 19224680 19228672 LSH