Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0525 ATGCATGTTATCCAACCTCTTCATCTCAGAACAACAACGTTGACTACCACAAAAAACATGTCTCTCTTCTTCTTCTTCTTCTTCTCTTTCTTCTTGTTCTTCACCATTCTTCAACTTTCATGTGCTCAACAACAATTCTTATCTTTCAACATCTCACACTCTCCATGGCTTCCATCTCAAAACAAAACTCTCATCTCTCCAAACACCAACTTCACTGCTGGTTTTTTCCCCATACCAAACTCTCTAAATCTCTTCAGTTTTTCAGTTTGGTTCTCCAAACTTCCAAAAACTTCTAACCCTGTTCTATGGAATGCATCTATCTCTCCACTCAACATTTCTACCTCACTTGTTATCACATCCAAAGGTGAGTTACTCCTCAATGGTGAACCCTTAAGAAATAGTCACACTTCTTCCAATTCCACACAACTCCTTCTAAGTAACATTGGAAACTTGAGTTTTGGAACTTGGAGTAGTTTTCATAACCCAACCAATACAATCTTGCCAAACCAAGTTATAACTGGGATTGAGTTATATTCCCTTGATGGGAAGTTTAAGTTCAACAACTCTCAGTTCTTGATCTTAAACTCATCCAATGTTCAATATTACAACACCCCAAGTCCTTTTATAAGTATGGATGATGAAGGGAAAATGAACATGGTGGGTAACTCTTTCCTTACTTCTGATTATGGTGATATCAGGTTCAGGAAACTTGTTCTTGATGATGATGGAGATCTAAGAATTTATAGCTTCTACCCTGAACAACAAAACAAGTGGGTTGTGGTTTGGAAAGGTATATGGGAGATGTGTTTAATCAAAGGAAAGTGTGGGCCTAATGCTATTTGCATGCCAAAAGATGATTCTGATGCTTCTACTTATTGTGTTTGCCCATCTGGGTTTAGCCCAAATAATGGTGGGCCTGAAAATGGTTGTTCAAGAAAAATTCAACTTTCAGGAAAAAGTCATTTTGTCAGGCTAGATTATGTGAACTACACTAGCAGCATAATCAATCAAATTAATGCTGCTAACTTCACAATATGTCAATCCAATTGCAGAACAGACTCAACATGTCTTGGCTTTGGGTTCAAATATGATGGGTCAGGCTATTGTGTTTTGCTGCAAGGAACTCAGCTTCAATATGGTTACTGGTCACCAGGTACTGAAACTGCCATGTTTCTAAAAGTTGATAAATCTGAATCAGAAGCAACCAATTTCATTGGCATGAGTGAGGTTTTGCAAACAACATGTCCTGTGAAGATAAGCCTGTCACTACCACCAAAGGACTCAAACACAACCACCAGAAACATTGTGATAATATGTGTCCTTTTTGCTGCAGAATTCATATCTGGGGTAGCTTTCTTCTGGTCTTTCCTCAAGAGATACATCAAGTATAGGGACATGGCCACTACACTAGGCCTTGAACTCTTGCCTGCTGGAGGCCCCAAACGTTTCACATACACTGAACTCAAAACAGCCACTCATGACTTCTCCAACCTCATAGGAAGAGGTGGCTTTGGAGATGTATATAAAGGTGAGTTGCCCGACCACCGAGTCGTCGCGGTGAAGTGCCTGAAGAATGTAGCAGGAGGTGATGCTGAGTTTTGGGCAGAAGTCACAATCATTGCTAGGATGCACCATCTCAACTTGGTCCGTTTGTGGGGTTTTTGTGCTGAGAAAGGTCAAAGGATACTTGTGTATGAGTACATCCCTGGAGGGTCATTGGATAAGTACTTATTCAAGGCCAGGTCTCTAAAGGGTATTATTAGTGGTGATTCTGATTCAAACACAGAACAAAAACCTGTTATGGATTGGAATGTGAGGTATAGAATTGGTCTAGGTGTGGCTAGAGCTATTGCATACTTACATGAAGAGTGTTTGGAATGGGTTTTGCATTGTGATATTAAGCCTGAAAATATTCTCATAGGTGATGATTTTTGTCCCAAGATATCAGATTTTGGGTTAGCCAAATTAAGAAAAAAGGAAGACATGGTGACTATGTCTAGAAGGAGAGGTACTCCTGGTTATATGGCTCCTGAATGGATCACTGCAGATCCAATCACATCAAAGGCTGATGTTTATAGCTTTGGGATGGTACTCTTGGAGCTTGTGAGTGGAGTTAGGAACTTTGAGATACAAGGGTCTCAAGTAAGAAGTGAGGAATGGTATTTCCCTAGTTGGGCTTTTGATAAAATGTTTAGAGAGATGAAAGTTGAAGACATTTTGGATGCTCAAATTAGGGATGTTTATGATAGTAGAGCCCATTTTGAATTGGTTAATAGAATGGTCAAGACTGCAATGTGGTGCCTGCAAGATAGGCCTGAGTTGAGGCCAACTATGGGAAAAGTTGCTAAGATGTTAGAAGGGACAGTGGAGATTAGTGAACCCAAAAAGCCCACTGTTTTCTTCCTTGGGGAAGAGTAG 2418 0.4012 MHVIQPLHLRTTTLTTTKNMSLFFFFFFSFFLFFTILQLSCAQQQFLSFNISHSPWLPSQNKTLISPNTNFTAGFFPIPNSLNLFSFSVWFSKLPKTSNPVLWNASISPLNISTSLVITSKGELLLNGEPLRNSHTSSNSTQLLLSNIGNLSFGTWSSFHNPTNTILPNQVITGIELYSLDGKFKFNNSQFLILNSSNVQYYNTPSPFISMDDEGKMNMVGNSFLTSDYGDIRFRKLVLDDDGDLRIYSFYPEQQNKWVVVWKGIWEMCLIKGKCGPNAICMPKDDSDASTYCVCPSGFSPNNGGPENGCSRKIQLSGKSHFVRLDYVNYTSSIINQINAANFTICQSNCRTDSTCLGFGFKYDGSGYCVLLQGTQLQYGYWSPGTETAMFLKVDKSESEATNFIGMSEVLQTTCPVKISLSLPPKDSNTTTRNIVIICVLFAAEFISGVAFFWSFLKRYIKYRDMATTLGLELLPAGGPKRFTYTELKTATHDFSNLIGRGGFGDVYKGELPDHRVVAVKCLKNVAGGDAEFWAEVTIIARMHHLNLVRLWGFCAEKGQRILVYEYIPGGSLDKYLFKARSLKGIISGDSDSNTEQKPVMDWNVRYRIGLGVARAIAYLHEECLEWVLHCDIKPENILIGDDFCPKISDFGLAKLRKKEDMVTMSRRRGTPGYMAPEWITADPITSKADVYSFGMVLLELVSGVRNFEIQGSQVRSEEWYFPSWAFDKMFREMKVEDILDAQIRDVYDSRAHFELVNRMVKTAMWCLQDRPELRPTMGKVAKMLEGTVEISEPKKPTVFFLGEE 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0525 805 Pfam S-locus glycoprotein domain 223 302 IPR000858 GO:0048544
Lal18g0525 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Lal18g0525 805 ProSiteProfiles Protein kinase domain profile. 493 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0525 805 PANTHER OS07G0415500 PROTEIN 25 805 - -
Lal18g0525 805 PIRSF SRK 17 805 IPR024171 GO:0004674
Lal18g0525 805 SMART serkin_6 493 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0525 805 SUPERFAMILY Protein kinase-like (PK-like) 476 786 IPR011009 -
Lal18g0525 805 Gene3D Transferase(Phosphotransferase) domain 1 569 797 - -
Lal18g0525 805 CDD STKc_IRAK 499 787 - -
Lal18g0525 805 ProSitePatterns Protein kinases ATP-binding region signature. 499 521 IPR017441 GO:0005524
Lal18g0525 805 ProSiteProfiles PAN/Apple domain profile. 310 395 IPR003609 -
Lal18g0525 805 PANTHER OS10G0101000 PROTEIN 25 805 - -
Lal18g0525 805 Pfam Protein kinase domain 497 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0525 805 Gene3D Phosphorylase Kinase; domain 1 467 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0525 Lal-Chr18 4332271 4336291 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0525 481 797 Receptor kinase-like Gene Family AT4G18250 40.432 1.93e-76 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lal18g0525 Pkinase 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0525 - - lang:109325652 1506.89