Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0514 ATGGCTTATCCTTGTTCTAACAAGGCCTTAGGTTGCTTTTTCTTATTTTCTCTTACTGTCTCTTCCCTTTCAACTTTTTCCTATGCTCATCTTAGGTACCTTGGTGAAGAAGGTACTTATTCAACACAACCTTTTGTTTTTGATGATGTAACATATCAAGTTGTAGATGGTATTTCACTTGCACCACAACCAGGACCTGAAACTTATGATGCTGAACCTCCAACAACATTCTCAGGAAATGATGATATTGCACCAGCACCTGAACCTGGAAATTTTGATGCTGAATCTCCAATTGGAAATGATTATAATGATAGTAAAGTTGTGTCTAATGAGAGGCTAAAAAATGCCTATGTTGCTCTTCAAGCATGGAAAGATGCTATTTACTCTGACCCTTTCAATACAACTGGTAACTGGGTTGGTGAAGATGTTTGCTCATACAATGGTGTGTTTTGTGTTGAAGCTCTTGATGATCCAAAGTTGAATGTTGTAGCTGGTGTTGATCTTAATAATGCAGATATTGCTGGGCACCTCCCAGAAGAGTTGGGGCTCTTGAAAGATGTTGCACTTTTTCATATTAACTCCAATAGATTCTGTGGAATTATCCCAGAGAGCTTTGAGAATCTCACTCTCATGCATGAATTTGATGTTAGCAACAACCGTTTTGTTGGTGGTTTTCCTTCTGTTGTACTCAAATGGAAAGACTTGAAGTACTTGGATATCAGATTCAATGACTTTGAAGGATGTTTACCTCAAGAGTTATTTGAAAAAGATCTTGATGCAATATTTTTGAACAACAACCGTTTCAGATGCAATATCCCAGAAACTCTAGGGAAATCCAATGCATCTGTTGTGGTTTTTGCTAACAACAATTTCACAGGCTGCATTCCAAAATCAATTGGAAACATGAAGAACTTGAATGAGATTGTTTTATTGGGCAATGATATTGGAGGATGTTTTCCAAAAGAGATTGGATTGTTAGAAAAATTAAATCTTTTGGATATTAGCAACAATGGGTTAGTTGGGACTTTGCCAACTTTGGAAAATTTGAAAAAAGTGGAAGTCATTGACATTTCACACAACAAGCTTAGTGGATATGTGTCTGACAATATTTGTCAACTACCTAAGCTGTGCAACTTCACATTCTCTAACAACTACTTCAATGGAGAAGCTCAAACATGTTTGACATCTTCAACTTCAAATGTTCTTTTTGATGACTCAAATAATTGTTTGGCAGGAAAGAAGAATCAGAAGAAATATAAGGATTGCTTACCTATACTTACTCGCCCTACAGATTGTAGCAAGGAATGTGGTGGTGGTGGCGGTGGTGCTAATGTCCCTTCAACACCAAAGGTGGAGACACCTCCAACACTACCACCTGTTGAAGATATCCCACCAACTTTGCCACCTGTTGATGATATCCCACCATCAGTTTTACCAGTTTCACCTCCTCCTCTAGTTGTTCAACCACCACCTACACTTGTCCTCTCTCCACCACCTCCAGTTCAGTCTCCTCCACCACCAGTCCAGTCTCCACCACCACCAGTCCAGTCTCCACCACCACCAGTCCAATCTCCACCACCACCAGTCCAGTCTCCTCCACCACCAGTCCAGTCTCCACCACCACCAGTCCAGTCTCCTCCACCACCACCAGTCCAGTCTCCACCACCACCAGTCCAGTCTCCACCACCACCACCAGTTCAGTCTCCACCACCACCAGTTCAGTCTCCACCACCACCAGTTCAGTCTCCTCCACCCCCTGTCTTCTCACCACCACCACCACCACCTGTAGTCCACTCTCCTCCTCCACCAGTCCAATCTCCTCCACCACCAGTCCATTCTCCTCCTCCACCAGTCTCCTCTCCTCCACCACCAGTCCATTCCCCACCACCATCAGTTCAGTCTCCTCCACCCCCTGTCTTCTCACCACCACCACCACCACCAGCAGTCCACTCTCCACCACCGCCAGTCCACTCTCCACCACCATCAGTCCCAACATGGGATGATGACATAATCTTACCACCAATCTTTGGATCTGAATACCGATCACCTCCTCCACCATCAATTGTTGGATACTAA 2076 0.4359 MAYPCSNKALGCFFLFSLTVSSLSTFSYAHLRYLGEEGTYSTQPFVFDDVTYQVVDGISLAPQPGPETYDAEPPTTFSGNDDIAPAPEPGNFDAESPIGNDYNDSKVVSNERLKNAYVALQAWKDAIYSDPFNTTGNWVGEDVCSYNGVFCVEALDDPKLNVVAGVDLNNADIAGHLPEELGLLKDVALFHINSNRFCGIIPESFENLTLMHEFDVSNNRFVGGFPSVVLKWKDLKYLDIRFNDFEGCLPQELFEKDLDAIFLNNNRFRCNIPETLGKSNASVVVFANNNFTGCIPKSIGNMKNLNEIVLLGNDIGGCFPKEIGLLEKLNLLDISNNGLVGTLPTLENLKKVEVIDISHNKLSGYVSDNICQLPKLCNFTFSNNYFNGEAQTCLTSSTSNVLFDDSNNCLAGKKNQKKYKDCLPILTRPTDCSKECGGGGGGANVPSTPKVETPPTLPPVEDIPPTLPPVDDIPPSVLPVSPPPLVVQPPPTLVLSPPPPVQSPPPPVQSPPPPVQSPPPPVQSPPPPVQSPPPPVQSPPPPVQSPPPPPVQSPPPPVQSPPPPPVQSPPPPVQSPPPPVQSPPPPVFSPPPPPPVVHSPPPPVQSPPPPVHSPPPPVSSPPPPVHSPPPSVQSPPPPVFSPPPPPPAVHSPPPPVHSPPPSVPTWDDDIILPPIFGSEYRSPPPPSIVGY 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0514 691 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 108 450 - -
Lal18g0514 691 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 517 593 - -
Lal18g0514 691 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 593 688 - -
Lal18g0514 691 SUPERFAMILY L domain-like 117 411 - -
Lal18g0514 691 MobiDBLite consensus disorder prediction 62 97 - -
Lal18g0514 691 MobiDBLite consensus disorder prediction 433 476 - -
Lal18g0514 691 MobiDBLite consensus disorder prediction 451 476 - -
Lal18g0514 691 MobiDBLite consensus disorder prediction 491 691 - -
Lal18g0514 691 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1 108 450 - -
Lal18g0514 691 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1 593 688 - -
Lal18g0514 691 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1 517 593 - -
Lal18g0514 691 PRINTS Proline rich extensin signature 453 465 - -
Lal18g0514 691 PRINTS Proline rich extensin signature 468 484 - -
Lal18g0514 691 PRINTS Proline rich extensin signature 488 500 - -
Lal18g0514 691 PRINTS Proline rich extensin signature 500 521 - -
Lal18g0514 691 PRINTS Proline rich extensin signature 526 542 - -
Lal18g0514 691 MobiDBLite consensus disorder prediction 491 662 - -
Lal18g0514 691 Pfam Leucine rich repeat N-terminal domain 117 151 IPR013210 -
Lal18g0514 691 Gene3D Ribonuclease Inhibitor 282 422 IPR032675 -
Lal18g0514 691 Gene3D Ribonuclease Inhibitor 117 281 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0514 Lal-Chr18 4258377 4260452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0514 1 435 Trihelix Transcription Factor Family AT3G19020 54.587 7.21e-161 486