Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0490 ATGGCTGTAGCTTCAAGATTCATGTGCACCACTCTTACTCATCACGGTTTTAGCTCAACAACACATAGAACCCATCTGGGTCATGCTCAGTTAACTGTTTCTTCACGCAAGCATCAAATTATTCACTGTTCAGTTTCTGCAAGTGATGCCACAAAAACCCCCTCAGTGATGGAAACCATTATTCCTTGGGGCTGTGATATTGATTCAGTAGAAAATGCATCAGCTTTGCAGAAATGGTTGTCAGAATCAGGCCTTCCACCACAGAAGATGGGAATACAAAAAGTTGATGTTGGAGAGAGAGGACTTGTTGCATTGAAGAATATAAGGAAAGGGGAGAAGCTTCTTTTTGTTCCTCCCTCATTAGTCATAACTGCAGATTCTGAGTGGAGTGTTCCAGAAGCTGGTGAAGTATTGAAAAGGAATTCAGTGCCCGATTGGCCATTAATTGCAACTTACCTCATAAGTGAAGCTAGCCGCATGAAATCTTCTAGATGGAGCAATTATATATCAGCCTTACCTCGGCAGCCTTACTCACTTCTTTACTGGTCACAAGCAGAACTGGATCGCTACCTGGAAGCTTCACAGATTAGAGAGAGAGCAATTGAAAGGATTAACAATGTGATTGGAACATACAATGATTTGAGGCTGAGAATATTTTCCAAATACCCTGATTTATTCCCGGAAGAGGTGTTCAACATAGACTCCTTCATATGGTCATTTGGCATTCTTTTTTCTCGATTGGTTCGGTTACCCTCCATGGATGGAAAGGTTGCCTTGGTTCCTTGGGCAGATATGCTGAATCATAGTTGTGATGTGGGGACATATTTGGATTATGATAAATCGTCGAAGGGAATTGTTTTTACGACAGATCGAGTCTATCAACCAGGTGAGCAGGTGTTTATTTCATATGGGAAAAAATCAAATGGAGAGCTTCTGTTATCTTATGGATTTGTTCCAAGGGAAGGTGCTAATCCTAATGATTCAGTTGAGTTGGCACTGTCACTCAAGAAATCTGATGAGTCCTATGTGCAGAAGTCAGAACTCTTGAAGAAGTATGGTTTATCAGAATCTCAGTGTTTTCCTATACAGATTACTGGTTGGCCATTAGAGTTGATGGCTTATGCTTATTTAGCTGTCAGTCCTTCAAGCATGAGAGGGCAATTTGAAGAGATGGCGGCTGCAGCATCAAATAAGATTTCAAACAAGAAGGATTTTCGATATCCTGAAATAGAGGAACAAGCATTACAATTCATACTTGATAGCTGTGAATCCAGTATATCAAATTACAACAAGTTCTTGCAGGCAAGGAAACACTTAAACCTGTACTTATGTCTTAGTTTCCCAATGGCCGATGTTTCGGAAAACCGTTATTTACAAGTTGTAAGTGGATCACTGGATTTGGATGTGACTTCTCCAAAACAGCTCAACAGAAGACTCTTTCTGAAACAGCTAGCTGTGGACTTATGTAATAGCGAGCGAAGGATATTGTTTCGTGCTCAATATATATTGAGAAGGAGACTGAGGGATATGAGAGCTGGTGAATTAAGAGCTCTAAAAATCTTTGATGGGTTTAGGAATCTTTTCCAATGA 1590 0.4038 MAVASRFMCTTLTHHGFSSTTHRTHLGHAQLTVSSRKHQIIHCSVSASDATKTPSVMETIIPWGCDIDSVENASALQKWLSESGLPPQKMGIQKVDVGERGLVALKNIRKGEKLLFVPPSLVITADSEWSVPEAGEVLKRNSVPDWPLIATYLISEASRMKSSRWSNYISALPRQPYSLLYWSQAELDRYLEASQIRERAIERINNVIGTYNDLRLRIFSKYPDLFPEEVFNIDSFIWSFGILFSRLVRLPSMDGKVALVPWADMLNHSCDVGTYLDYDKSSKGIVFTTDRVYQPGEQVFISYGKKSNGELLLSYGFVPREGANPNDSVELALSLKKSDESYVQKSELLKKYGLSESQCFPIQITGWPLELMAYAYLAVSPSSMRGQFEEMAAAASNKISNKKDFRYPEIEEQALQFILDSCESSISNYNKFLQARKHLNLYLCLSFPMADVSENRYLQVVSGSLDLDVTSPKQLNRRLFLKQLAVDLCNSERRILFRAQYILRRRLRDMRAGELRALKIFDGFRNLFQ 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0490 529 Gene3D set domain protein methyltransferase, domain 1 30 317 - -
Lal18g0490 529 ProSiteProfiles SET domain profile. 88 304 IPR001214 GO:0005515
Lal18g0490 529 PIRSF RMT_SET 441 526 IPR011192 GO:0009507|GO:0030785
Lal18g0490 529 PIRSF RMT_SET 1 449 IPR011192 GO:0009507|GO:0030785
Lal18g0490 529 Pfam Rubisco LSMT substrate-binding 337 496 IPR015353 -
Lal18g0490 529 Gene3D - 323 514 IPR036464 -
Lal18g0490 529 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 19 298 - -
Lal18g0490 529 Pfam SET domain 100 304 IPR001214 GO:0005515
Lal18g0490 529 SMART set_7 88 310 IPR001214 GO:0005515
Lal18g0490 529 PANTHER - 19 298 - -
Lal18g0490 529 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 334 524 IPR036464 -
Lal18g0490 529 SUPERFAMILY SET domain 72 320 IPR046341 -
Lal18g0490 529 CDD SET_RBCMT 87 318 IPR044431 GO:0016279|GO:0018022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0490 Lal-Chr18 4053321 4058688 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lal18g0490 SET 4.6e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0490 - - gmx:100803319 814.298