Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0484 ATGTCAATTTACGATGCACCTTTCATAGACTCACACCTCTCTAAACCCACTTCCATCTTCGGCCTCCGTCTCTGGGTTGTCATCGGTATCCTCCTCGGCTCCTTCATCGTCCTCTTCCTCTTCCTCCTCTCTCTTTGCCTCACCTCTCGCCGCCACCGCCACCGCAACACCACCACCACCACCACCAAACCCCAAACCATCCCAGTCATCTCCAAGGAAATCCAAGAAATCGTCCACGTGGACACAGGGAAGGGGAGCGGGGAGAGTGTTTGTGAAACCACGACGTCGTCGTTTGGGAGTGGGAGCGTGGGGCCCGATGTGTCACATCTTGGGTGGGGAAGATGGTACACGTTGAGAGAGATTGAAGCTGCAACTAATGGATTATGTGAAGAGAATGTAATTGGTGAAGGTGGTTATGGTATTGTTTATCGTGGTCTTCTTATTGATGGGACTAAACTCGCTGTTAAGAATCTCTTCAATAACAAGGGCCAAGCTGAGAGGGAATTTAAAGCAGAGGTAGAAGTAATTGGTCGTGTAAGGCACAAGAATCTTGTTAGGTTGCTTGGCTATTGTGTTGAAGGGGAATACAGGATGCTTGTGTATGAATATGTTGATAATGGAAATCTTGAACAGTGGCTGCATGGGGATGTTGGATCTATAAGCCCTCTCACATGGGATATCCGCATCAACATTATATTCTGCACAGCAAAAGGATTGGCTTATCTTCATGAGGGTCTTGAACCAAAAGTTGTCCACCGAGATGTGAAATCAAGCAACATACTCCTCGATCGCCAATGGAACTCAAAGGTTTCTGACTTTGGCCTTGCTAAGCTTTTGTGTTCTGACCATAGTTATGTCACAACTCGGGTGATGGGGACATTTGGTTATGTTGCACCTGAGTATGCCTGCACTGGAATGCTGACTGAGAAGAGTGATGTTTATAGCTTCGGGATACTTATCATGGAAATAATTACTGGTAGAAGTCCTGTTGATTATGGCAGACCACAAGGAGAGGTTAATTTAATAGAGTGGTTGAAAAATATGGTTGGGAATCGTAAAGCTGAGGAAGTAGTTGATCCTAAGCTCCCTGAGAAGCCATCTCCAAAGGCTCTTAAACGTGCTCTGTTGGTTGCTCTTCGATGTGTTGATCCTGATGCGACAAAGAGGCCTAAAATGGGACATGTGATCCACATGCTTGAGGCAGACGACCTCTTATTCTGTGATGAACGAAGAGTCAGGGGAGAGTCTTCCCGATCCCATGGTGATTATCAACAAGAGCATAAGGAGTCAAGTTTAGATAAAAAACCAATAGGTGGAGACATCACTGATATCACTGATCGAAGTGAAGATGATAGAACTAGAAATCACCATCAGCCCACCAGGTCGAGGTCATAG 1395 0.4595 MSIYDAPFIDSHLSKPTSIFGLRLWVVIGILLGSFIVLFLFLLSLCLTSRRHRHRNTTTTTTKPQTIPVISKEIQEIVHVDTGKGSGESVCETTTSSFGSGSVGPDVSHLGWGRWYTLREIEAATNGLCEENVIGEGGYGIVYRGLLIDGTKLAVKNLFNNKGQAEREFKAEVEVIGRVRHKNLVRLLGYCVEGEYRMLVYEYVDNGNLEQWLHGDVGSISPLTWDIRINIIFCTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWNSKVSDFGLAKLLCSDHSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIITGRSPVDYGRPQGEVNLIEWLKNMVGNRKAEEVVDPKLPEKPSPKALKRALLVALRCVDPDATKRPKMGHVIHMLEADDLLFCDERRVRGESSRSHGDYQQEHKESSLDKKPIGGDITDITDRSEDDRTRNHHQPTRSRS 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0484 464 CDD STKc_IRAK 134 400 - -
Lal18g0484 464 SUPERFAMILY Protein kinase-like (PK-like) 106 400 IPR011009 -
Lal18g0484 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Lal18g0484 464 PANTHER BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1 81 - -
Lal18g0484 464 PANTHER BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 84 444 - -
Lal18g0484 464 Gene3D Phosphorylase Kinase; domain 1 111 203 - -
Lal18g0484 464 ProSiteProfiles Protein kinase domain profile. 128 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0484 464 PANTHER OS01G0323000 PROTEIN 1 81 - -
Lal18g0484 464 PANTHER OS01G0323000 PROTEIN 84 444 - -
Lal18g0484 464 Pfam Protein tyrosine and serine/threonine kinase 131 399 IPR001245 GO:0004672|GO:0006468
Lal18g0484 464 MobiDBLite consensus disorder prediction 415 464 - -
Lal18g0484 464 SMART serkin_6 128 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0484 464 ProSitePatterns Protein kinases ATP-binding region signature. 134 156 IPR017441 GO:0005524
Lal18g0484 464 MobiDBLite consensus disorder prediction 415 457 - -
Lal18g0484 464 Gene3D Transferase(Phosphotransferase) domain 1 204 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0484 Lal-Chr18 4018113 4020457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0484 26 400 Trihelix Transcription Factor Family AT5G38560 40.674 1.82e-93 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lal18g0484 Pkinase 3.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0484 - - gmx:100777348 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0484 18 4018113 4020457 Lal18g0484 18 4018113 4020457 ECH
Lal22g0881 22 6849712 6852711 Lal18g0484 18 4018113 4020457 LSH