Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0481 ATGCCACTTCCTTCCGTCAATCCTCTTCATCCGCCACAACATCCTCCTCCCGCCGCTGCGGATTCCTCCTCCACCGCCTCCGTTTCATCATCTACTCTTAACTCGGTTGATGATCTTTGCAAGAAGATACGGAAACCGTATACGATTACTAAGTCTAGAGAGAACTGGACCGAGCAGGAACATGACAAGTTTCTTGAAGCTCTCCAAATTATACGCAGTCACGCGCAAAAGTATTTTCTTAAAGTCCAGAAGGCACCTAAAACTGCTCCTACTGTATCCCAAGTCACAGGGCCATTGCAATCTTCACATGCTTTCGTTGAACCTGCATATATATATATAGTTCGGATTCATCATCTGTTCTTGGAACTCCAGTTACCAATGCGGGTTTCTCATCTTGGAATTATGATGACATGGGTTTTACTGGAGCTGGGCAAACTGTTCCTCCTAATTGTTGCTATAGCAGTAGTAATGAGAGCACCCTTTCAGCTCGGCCAAGTGGCAAAGGGATTGATCAAGGCAAGCTGGGCAAACTCCGGTTGGAATGCTTCTTTTATCTCTAGTTTGAATCTGATTGAGCTTGAAGTTGAATTAATGCATGAACAAATAGGTTATGCAAATTTCATGACATTGAATTTTGGTGGCATACGTTTTACTAGTATGTTCATGATTCTTGCCATGGTCTTGACAAGTTCAACTACTGTATGTCTGTATGCAGTGATTCCAGATTTTGCACAAGTCTACAGATTCATTGGCAGTGTATTTGATCCCTATTCAACTAATCATGTACAGAGACTGAAACAGATGGACCCAATAAATGTGGAAAAGGTATTGTTGTTGATGAGAAACCTCTCCATCAATTTAATGAGTCCTGAATTTGAGGATCATAAAAGGCTTCTTTCTTCGTTTGGTGCTGACTCAGAAAAGGAAAAGCATGGTAATCTTTCCAGGGAATCCCTTTCTAGAATATCTGAAAGTGCTATTCTATCTGCTTAA 993 0.4149 MPLPSVNPLHPPQHPPPAAADSSSTASVSSSTLNSVDDLCKKIRKPYTITKSRENWTEQEHDKFLEALQIIRSHAQKYFLKVQKAPKTAPTVSQVTGPLQSSHAFVEPAYIYIVRIHHLFLELQLPMRVSHLGIMMTWVLLELGKLFLLIVAIAVVMRAPFQLGQVAKGLIKASWANSGWNASFISSLNLIELEVELMHEQIGYANFMTLNFGGIRFTSMFMILAMVLTSSTTVCLYAVIPDFAQVYRFIGSVFDPYSTNHVQRLKQMDPINVEKVLLLMRNLSINLMSPEFEDHKRLLSSFGADSEKEKHGNLSRESLSRISESAILSA 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0481 330 PANTHER SWI/SNF COMPLEX-RELATED 13 70 - -
Lal18g0481 330 PANTHER SWI/SNF COMPLEX-RELATED 238 320 - -
Lal18g0481 330 PANTHER SWI/SNF COMPLEX-RELATED 83 113 - -
Lal18g0481 330 MobiDBLite consensus disorder prediction 1 30 - -
Lal18g0481 330 SUPERFAMILY Homeodomain-like 47 84 IPR009057 -
Lal18g0481 330 MobiDBLite consensus disorder prediction 1 18 - -
Lal18g0481 330 PANTHER MYB TRANSCRIPTION FACTOR 238 320 - -
Lal18g0481 330 PANTHER MYB TRANSCRIPTION FACTOR 13 70 - -
Lal18g0481 330 PANTHER MYB TRANSCRIPTION FACTOR 83 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0481 Lal-Chr18 3979690 3985082 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0481 - - mnt:21396116 181.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0991 6 7049453 7054920 Lal18g0481 18 3979690 3985082 LSH
Lal6g0991 6 7049453 7054920 Lal18g0481 18 3979690 3985082 PCT
Lal18g0481 18 3979690 3985082 Lal6g0991 6 7049453 7054920 PCT