Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0468 ATGGCTGGGATTGATGATAATGTTGCGCTAGCCGCGGATTGGGGTCTTCCAAATCCGAACCCGAGAATCCATTTTTCTAGAATGCTAGGTGAGGATAATGTAACAAGATCAATCTCAGATCCTCCTGGAAATGGTAGAACAGGGTATGTCTTTCCAGGGACTCATGAACAGGCCGAGACAGGGAAAGGAGACATAAATGATATCTCACAAGATGGTGATTCTGGTGACCAATTGACCGACTTGAGCTTTATGGCCGATCAGAAATCAAACTCGCGAGAAGCTCTTGTGGAAAGAATGGCTGCTAGAGCTGGGTTTAATGCTCCGAGGTTGAATACAGAAAGCATTAGATCTACTGATCTGACACTTAGTACTGATATTCAATCTCCTTACTTGACCATACCTCCGGGTCTCAGTCCCACTACACTTTTGGATTCTCCGGTGTTCCTTGCAAATGCACTGGCACAGCCATCTCCAACAACTGGAAAGTTTCCGTTCATCTCAAATGGCAACATCCGGTACTCAGAATTATCATCTGATGCTCCTGAAAAATCTAAAGAAAACCTTGATGATCTCTATGCATCATCTTTTGCTTTCAAGCTTGCAACTGATTCGGGCTCATCTTTTTATTATGGTGCTGAAAGGAAAGTAAATCCAACTACAGTTCCTCAACAATCTGTTCCTGGTATTGAGGCCTCTGTTCAGTCAGAAAATTCTTTCCAATCTCAAAGTGTTGATGGCATCAAGGTTCAAACTGAGAACGGAAGTGGCTTCCATCATCAGCCAGACTTTATCGAGTCGCCTCCTCAAGATGATAACAGATTTAAATCTTTATCAGGTGATCGAAGGGCATTTGATGCTGTTGGTGGTATCACTGAGCGTTCCACACCACCTGAAGAGCTAGCAGATGAAGAGGGAGATCAAAGAGGGAATGGAGACTCAGTGGTTGCTGATGTCGGTGGTACACCGTCTGAAGATGGATATAACTGGAGAAAATATGGCCAAAAGCAAGTTAAGGGCAGTGAGTATCCAAGAAGTTACTATAAGTGTACACATCCAAATTGTCCGGTTAAGAAGAAAGTGGAAAGATCTCACGAGGGCCACATAACAGAGATTATCTACAAGGGAGCGCACAACCATCCCAAACCACCTTCAAATCGTCGGTCCAGCATAGGGCCAGGCAACCCTAATACTGACATGCAAGTGGACAATCCTGAACATGTTGGACCACATAATGGTGGTAATGGTGACCTGGGCTGGGTTAATGTACAAAAGGGAATTATAGCTGGAGCAGCTAATTGGAAGCATGACAACCCTGAAGTGACATCATCGGCATCTGTCAGCCCTGAATACGGCAACCAGCATACCAATTTTCAGACTCAGAATGGTACTCACATTGATTCAGGAGATGCAGTGGATGCCTCTTCTACTTTTTCTAATGAAGATGAAGATGACCGAGGCACTCATGGTAGTGTCTCATTAGGCTGTGATGGGGAAGGAGATGAATCTGAATCTAAAAGAAGGAAACTGGAATCTTATGCAACAGAGATGAGTGGAGCTACAAGAGCTATTCGTGAGCCTAGAGTTGTTGTACAGACTACCAGTGAAGTAGATATCCTCGATGATGGCTATCGATGGCGAAAGTATGGACAAAAAGTTGTTAAAGGAAATCCAAATCCAAGGAGTTATTATAAGTGCACCAGCACTGGCTGCACGGTGAGGAAGCATGTCGAGAGAGCATCGCATGACCTCAAATCTGTGATCACTACTTACGAGGGAAAGCACAATCACGATGTTCCTGCTGCTCGTGCTAGCAGTCATGTCAACACTACGACATCTAGTGCTGTTCCTGGGCAAGGTCATGTTCATAGACCTGAACCATCTCAAGTTCACAATGGCATTGGAAGGCTTGAAAGGCCTTCCCTGGGCTCATTCAACCTACATGGAAGGCAACAGCTAGGATCTTCCAATGGCTTCTCCTTCGGTATGAATCATCAACCTATGCTCTCGAACCTGACAATGCCAGGATTCGGAACTGGGCAAGGAAAGCTTCCTGCCATGCCGATTCATCCATTCTTGGCACAACAACGCCCAATGGCAAATGAAATGGGTTTTATGTTAGCAAAGGGAGAACCAAATGTGGAACATATTCCTGACCGTGGCTCATCACTCTATCATGAAATTATGAATCACATGCCTCTTGGACCTCATATGTAA 2214 0.4481 MAGIDDNVALAADWGLPNPNPRIHFSRMLGEDNVTRSISDPPGNGRTGYVFPGTHEQAETGKGDINDISQDGDSGDQLTDLSFMADQKSNSREALVERMAARAGFNAPRLNTESIRSTDLTLSTDIQSPYLTIPPGLSPTTLLDSPVFLANALAQPSPTTGKFPFISNGNIRYSELSSDAPEKSKENLDDLYASSFAFKLATDSGSSFYYGAERKVNPTTVPQQSVPGIEASVQSENSFQSQSVDGIKVQTENGSGFHHQPDFIESPPQDDNRFKSLSGDRRAFDAVGGITERSTPPEELADEEGDQRGNGDSVVADVGGTPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSHEGHITEIIYKGAHNHPKPPSNRRSSIGPGNPNTDMQVDNPEHVGPHNGGNGDLGWVNVQKGIIAGAANWKHDNPEVTSSASVSPEYGNQHTNFQTQNGTHIDSGDAVDASSTFSNEDEDDRGTHGSVSLGCDGEGDESESKRRKLESYATEMSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSTGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARASSHVNTTTSSAVPGQGHVHRPEPSQVHNGIGRLERPSLGSFNLHGRQQLGSSNGFSFGMNHQPMLSNLTMPGFGTGQGKLPAMPIHPFLAQQRPMANEMGFMLAKGEPNVEHIPDRGSSLYHEIMNHMPLGPHM 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0468 737 SMART WRKY_cls 539 598 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal18g0468 737 SMART WRKY_cls 323 381 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal18g0468 737 Gene3D WRKY domain 526 592 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal18g0468 737 PANTHER WRKY TRANSCRIPTION FACTOR 2-RELATED 106 670 - -
Lal18g0468 737 SUPERFAMILY WRKY DNA-binding domain 321 382 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal18g0468 737 Pfam WRKY DNA -binding domain 324 380 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal18g0468 737 Pfam WRKY DNA -binding domain 540 596 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal18g0468 737 MobiDBLite consensus disorder prediction 498 512 - -
Lal18g0468 737 Gene3D WRKY domain 312 383 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal18g0468 737 MobiDBLite consensus disorder prediction 602 617 - -
Lal18g0468 737 MobiDBLite consensus disorder prediction 600 626 - -
Lal18g0468 737 MobiDBLite consensus disorder prediction 382 401 - -
Lal18g0468 737 MobiDBLite consensus disorder prediction 296 310 - -
Lal18g0468 737 MobiDBLite consensus disorder prediction 254 331 - -
Lal18g0468 737 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 106 670 IPR044810 GO:0003700
Lal18g0468 737 MobiDBLite consensus disorder prediction 264 280 - -
Lal18g0468 737 ProSiteProfiles WRKY domain profile. 534 599 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal18g0468 737 ProSiteProfiles WRKY domain profile. 324 382 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal18g0468 737 MobiDBLite consensus disorder prediction 436 475 - -
Lal18g0468 737 SUPERFAMILY WRKY DNA-binding domain 531 599 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal18g0468 737 MobiDBLite consensus disorder prediction 372 418 - -
Lal18g0468 737 MobiDBLite consensus disorder prediction 433 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0468 Lal-Chr18 3871680 3876131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0468 1 732 WRKY Transcription Factor Family AT5G56270 47.582 0.0 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal18g0468 WRKY 3.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0468 K18835 - gmx:100796545 1145.18