Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0460 GTCCACACTAATGGCATCAAACTACAAAAGTTCCAACAATCCCCAAACTATGTAGGTGATGATTGCCATAACTCAACAGAACAGGTTCTCACAAATGCATACCAAACAAACCTTAACAACACCCTCTCATGGCTATCCTATGATGCTTCCACAAGTAAAGGATATAACCACACCACCATAGGAAATGATACAAATGATGCTGTCTATGCTCTTTATGATTGTAGGGGTGATGTCACTGGATCTTTTTGCCAGTTCTGTGTCTCCACAGCAGCTTCACAAATTCTTCAGATCTGCCCTAAAAGATCATCAGCTATTATATGGTATAACTTCTGCATTCTCAGGTACTCCAACCATGATTTCTTTGGGAACATTACAATAACCCCATCATGGCAAATTTTGGGACACAAAAACATCACTAATCAAGAAGAGGCTAAGAAGGCTAAGAACTTTATGCAAAGTTTGATAAGAAAAGCTACAGTGGAGACCAACATGCTTTATGCAATGGGTAGCTTCAATTTAAGTGCTAATAATGAGGAAAGGTATGGGTTGGTGCAATGCAGCAGAGACATTAATAGTGAGCAATGTGGTGAGTGTTTGGAAGCAATGTTAGATAAAGTTCCTCAATGTTGTGAAACTAAGTTGGGATGGCAGGTTTTGGCTCCAAGCTGTTTGATGAAGTATGATGATAATATGTTCTATTTGATTAATGATAAGACAACTTCTCCTTCCTCTTTGCCTAATCCAGTGAAGGAGGAAGCTAGCAGTAAGTCTAAAACCTATATTATCATCATAATTTGTGTGTTGGTGGCAGTAGCTCTACTAAGTTTCTCTATCTACTATTTATGGCTGAGGAAGCAATCAAATAAAGATGGAATGATATCAGAGACTACTCCAATATCTTTTCATGACCATGCTCAAAGAGGGGATTCAATAAATGCAGATCTTCCTACAATCCCTTTAATTTGGATAAAGCATAGTACTAATAACTTTTCAGAGGAGTGTAAATTAGGAGAAGGTGGATTTGGTCCTGTTTATAAGGGAAGTTTACAAGATGGGACAGAAGTTGCTGTCAAAAGACTCTTAACAAAATCTGGTCAAGGTTTACAGGAGTTTAAGAATGAAGCAATCTTTATAGCTAAACTGCAACATAGGAACCTTGTCAGACTCTTAGGATGCTGCATTGAAGAAAATGAAAAGCTTCTAGTATATGAGTACATGCCAAATTCTAGCCTTGACCTTCATCTCTTCAGTATGTTCTTTTCACTTTTAACTACACTAAATTTAGGTCCTTTACTTTTATTGTTACCTGAAGGTCATAGGTTCAAGTCCTATAAACACTTTTTCGCTTGCGATGATAAGGCTTGTGCACTCGGCCACCTTTTATTGAAAGCAGCCCCTCCGCTTATCGGGGAAGGCTGTGTACATCTACCATTCCCTGATCTTACTAGGCCGCCCTTTTTCTATTTCCTATACTCTTCCAGTTTGCTATGCAAACAACTCTGTAGGAATTACCATTTCAAGATACTATTCCTGTGTTGCTTTTTAGAAGAGGAAAAACGAAAACAACTAGATTGGAAGCTACGTGTGAGCATTATTAATGGAATAGCAAAAGGACTTCTATATCTTCATGAAGACTCAAGACTTAGAGTAATCCATAGAGATATGAAAGCTAGCAATGTTCTTTTGGATCGAGAGATGAATCCTAAGATATCAGATTTCGGTTTGGCACGGGCATTTGAGAAAGACCAGAGTGAGGAAAATACAAGAAGAGTTATGGGCACCTATGGATACATGGCTCCAGAGTATGCTATGGAAGGGTTATATTCAGTGAAATCTGATGTTTTCAGCTTTGGTGTTCTTCTATTAGAAATCATTTGCGGTCAAAGGAATAGTGGATTCTATCTTTCAGATCATGGCCAAAGTCTTCTTCTATATGTAAGTTTTTCTGCTCTTTTATCAGAAGAAGCAATAGATAGACCAACAATGTCCACAGTTGTTGTCATGCTTGCAAGTGACACAATGGTCCTTCCTAATCCTAATCATCCTGCATTTTCAGTTGGAAGAAAGATCAAGGAAGAAGAATCAACATCAAAATCTTCTAAAGATGCTTCTGTTAATGAAGTAACAATCTCAAATGTTGTACCTAGGTAG 2151 0.3794 VHTNGIKLQKFQQSPNYVGDDCHNSTEQVLTNAYQTNLNNTLSWLSYDASTSKGYNHTTIGNDTNDAVYALYDCRGDVTGSFCQFCVSTAASQILQICPKRSSAIIWYNFCILRYSNHDFFGNITITPSWQILGHKNITNQEEAKKAKNFMQSLIRKATVETNMLYAMGSFNLSANNEERYGLVQCSRDINSEQCGECLEAMLDKVPQCCETKLGWQVLAPSCLMKYDDNMFYLINDKTTSPSSLPNPVKEEASSKSKTYIIIIICVLVAVALLSFSIYYLWLRKQSNKDGMISETTPISFHDHAQRGDSINADLPTIPLIWIKHSTNNFSEECKLGEGGFGPVYKGSLQDGTEVAVKRLLTKSGQGLQEFKNEAIFIAKLQHRNLVRLLGCCIEENEKLLVYEYMPNSSLDLHLFSMFFSLLTTLNLGPLLLLLPEGHRFKSYKHFFACDDKACALGHLLLKAAPPLIGEGCVHLPFPDLTRPPFFYFLYSSSLLCKQLCRNYHFKILFLCCFLEEEKRKQLDWKLRVSIINGIAKGLLYLHEDSRLRVIHRDMKASNVLLDREMNPKISDFGLARAFEKDQSEENTRRVMGTYGYMAPEYAMEGLYSVKSDVFSFGVLLLEIICGQRNSGFYLSDHGQSLLLYVSFSALLSEEAIDRPTMSTVVVMLASDTMVLPNPNHPAFSVGRKIKEEESTSKSSKDASVNEVTISNVVPR 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0460 716 ProSiteProfiles Gnk2-homologous domain profile. 16 120 IPR002902 -
Lal18g0460 716 ProSiteProfiles Protein kinase domain profile. 330 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0460 716 MobiDBLite consensus disorder prediction 686 700 - -
Lal18g0460 716 Pfam Salt stress response/antifungal 22 117 IPR002902 -
Lal18g0460 716 Pfam Salt stress response/antifungal 141 229 IPR002902 -
Lal18g0460 716 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 9 417 - -
Lal18g0460 716 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 515 646 - -
Lal18g0460 716 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 653 714 - -
Lal18g0460 716 Gene3D Transferase(Phosphotransferase) domain 1 511 676 - -
Lal18g0460 716 Gene3D - 16 120 IPR038408 -
Lal18g0460 716 Gene3D - 129 232 IPR038408 -
Lal18g0460 716 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 653 714 - -
Lal18g0460 716 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 515 646 - -
Lal18g0460 716 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 9 417 - -
Lal18g0460 716 SMART serkin_6 330 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal18g0460 716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 550 562 IPR008271 GO:0004672|GO:0006468
Lal18g0460 716 Pfam Protein tyrosine and serine/threonine kinase 334 628 IPR001245 GO:0004672|GO:0006468
Lal18g0460 716 MobiDBLite consensus disorder prediction 685 716 - -
Lal18g0460 716 Pfam Domain of unknown function (DUF3403) 671 716 IPR021820 GO:0004674
Lal18g0460 716 Gene3D Phosphorylase Kinase; domain 1 295 405 - -
Lal18g0460 716 MobiDBLite consensus disorder prediction 701 716 - -
Lal18g0460 716 ProSiteProfiles Gnk2-homologous domain profile. 126 232 IPR002902 -
Lal18g0460 716 SUPERFAMILY Protein kinase-like (PK-like) 316 692 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0460 Lal-Chr18 3802439 3810453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0460 112 716 Receptor kinase-like Gene Family AT4G21400 32.214 1.67e-80 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal18g0460 PK_Tyr_Ser-Thr 3.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0460 - - lja:Lj0g3v0351729.1 568.54